[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/votca-csg/ - gentoo-commits

From:	Christoph Junghans <ottxor@g.o>
To:	gentoo-commits@l.g.o
Subject:	[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/votca-csg/
Date:	Tue, 27 Sep 2016 18:13:54
Message-Id:	`1475000017.2fb28aa6983f46e944d9f18cd7491ededc7e29a1.ottxor@gentoo`

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commit:     2fb28aa6983f46e944d9f18cd7491ededc7e29a1

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Author:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>

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AuthorDate: Tue Sep 27 16:29:34 2016 +0000

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Commit:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>

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CommitDate: Tue Sep 27 18:13:37 2016 +0000

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URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2fb28aa6

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sci-chemistry/votca-csg: version bump

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Package-Manager: portage-2.3.0

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 sci-chemistry/votca-csg/Manifest                 |   3 +

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 sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild | 114 +++++++++++++++++++++++

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 2 files changed, 117 insertions(+)

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diff --git a/sci-chemistry/votca-csg/Manifest b/sci-chemistry/votca-csg/Manifest

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index fb5ff9a..16da3c9 100644

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--- a/sci-chemistry/votca-csg/Manifest

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+++ b/sci-chemistry/votca-csg/Manifest

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@@ -1,9 +1,12 @@

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 DIST votca-csg-1.2.4.tar.gz 188345 SHA256 375b428c90247a3877f71c2d96200969bcaf2b081b8c7332ac770720df43646a SHA512 da814154be6700b56509d899ea16a2f974fd951792c78f2f8717b39b0165fe19121fefb2ef9531c63a8d4558d15776058d24b13e0e7ad0abb9d7b11fac0f5d1a WHIRLPOOL 64a86b09ae00435c68bf09e960c1d1738648811fe2a9ffb18f5529d30d6f94ebf1fc218b14e1ee0bfc911e5ca1e92c25404be045cf28e16ced98fd7ee4421418

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 DIST votca-csg-1.3.1.tar.gz 242384 SHA256 608225256cf97552cf860cb3754f59a49c55d8433cff07440b8a252645e7bcb6 SHA512 fed4e164b9661d48fd8fa3f57c0a567b88ef2fe0a7a02cafba1d0b1d557529e5259161f558cae95117df8cae996c30486877c0e5aff96d1e8100341bfb674c20 WHIRLPOOL 553fa0b7fb2e142b984a5be6eff1a4e6e89ea2e78a3e7081441d88a498d2aa2bb5cd5e90456656713a646a7f82875fa79d7b9fa62c66ce9edc084f995f936c61

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 DIST votca-csg-1.3.tar.gz 242169 SHA256 eace2b90bcd9318ef257355daf09cbd15b10906c44af95d36454aa969a032cff SHA512 c1314672227feb361991b20cb1511473f23df1f0ff337ddc11319f2261ea19ac5c895de72d1da705026520483eebf1477462ea63275451c9fd1e6bbf4826bd76 WHIRLPOOL 2b48e19705fccc8b6af336536d90fdaf168bda05f327a688e604bd079a69b8b9b816d2d549e510659367e397229fbb433c7c406d462f809e0b4ae98c22a8b81b

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+DIST votca-csg-1.4_rc1.tar.gz 346825 SHA256 ef13e1d75239cbfb1ef45927efbd1eb8135b0e616cd6e7f693187ffa2cde4eb7 SHA512 291fb5ce6b458fd8c1e7d30ad24d41a402c7794ce853db860d03148b53ae024925d36233e8b9e388e9e64819c3aba2a8dd89a3180a3fd1185dfdb93674df03e3 WHIRLPOOL 65cc9945ae7ba50184922cb375c0691c951152a918c7f79ce93758b54b8301c2faa497bb4960dd5e246085d1f965e633387905a4a293efb266231379466db794

25

 DIST votca-csg-manual-1.2.4.pdf 1029132 SHA256 78a68955c96700d432249f712e0601376d5d61fef607860fe32d0ce0dcb70cff SHA512 66b7cf869b2b06d4133b341934fd013717b17c90426f4cdf637ef3bb6119e9f6b67cbde56b7f6b6c777dba9fb311df42dd34d8fe23331f1656439acb541d81bf WHIRLPOOL 629e0e6a8900bb7e4a96b7e1020f86ccacd5a7e7258a493d565c94986a0907371a37d45bf499517a74ad29cf2b606965746e0d90b6be91777f2b0a85f2781732

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 DIST votca-csg-manual-1.3.1.pdf 1266375 SHA256 320060a77739d3c9ca98116edde94468e136b4bbd38970b82c874eed30af4ee8 SHA512 3335309b364cebcba25269c39dc2383e663a6b46111b02120c63d408a6fd9c3361408beb528d664ce6e13311e5ebff4a4c2772cf2f0e668904b1d9e43030d321 WHIRLPOOL 04adb86ffb10e9e0ecd754ab29940468ec32ddd1f6de1796dd2e89a49e0b60df6a4ecbccab60a085e2619fab480bc63dbb4378490ccfc024c8335ceade983955

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 DIST votca-csg-manual-1.3.pdf 1266541 SHA256 1520f2c18972a2ec5e0a7e847ae294cee1e6fa5682010a314f2e45c264e59cec SHA512 eb5d88f6cba30d9fd8c3cb11cd6c08dd3e717fccdcbef11c3363d4eb36d23000d8bd7b448c0a5311bcaee2b502e50d7aadb0faf7c9a5e5e9c6e1e37b1e09ec7e WHIRLPOOL f411bdc929515594200a636e6f5e3338797ae35dfe8ba3ddb01913cea85973dccca6482a4aa276ce68689a8f7c4c6d47ae448f2e3ce549d3dba35a1d40eeb44d

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+DIST votca-csg-manual-1.4_rc1.pdf 1268730 SHA256 4dc27fa2fb2300ceb0e7f601f0e0b3be91bfd20666126de80d5d977e1230bd11 SHA512 0e3d7ce8e7c63f24e13c099a70cfc30655e553ebdffe80731afcd7ae7f4c35d6c4a8976125e3b9f7dee01c8acc33b189c66096a056c6d70733fc970dd557ec5c WHIRLPOOL 0c7062d13a703117044b8779d8d4e4f207f274a2f7583ed2e8f753f3325c479aefc134ca2e5d9cecd2c1d5cab1e82a3b012593917513e8a5899652d502236a1b

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 DIST votca-csg-tutorials-1.2.4.tar.gz 3721034 SHA256 94b10f23f6e49c1279cdeea87dfee9c19b44373c74212340acebc06eb11e0245 SHA512 8d78a6ff02aedf97c2b640714fd7acfb7c4b0d03ec0141fa89f0ba041e1d2ec07477653d92effd4c96a6497271ad58f5c3397e1fc183c1c856285f6f8b5ceaf5 WHIRLPOOL ea0df816d2f26f12271250137b51f42ecc4a16eea622d37833d4dcc299732c413ee9f71a67767957b13ce8b44a96e9b1389bbbbdb66015c4b5c6d577d4483cf1

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 DIST votca-csg-tutorials-1.3.1.tar.gz 7602667 SHA256 7f283d14bec05cf617f1fb8026ee07af2bb1c517ea5a8526e2f318024cbf7069 SHA512 2475d8c8b40df1307c499387d352bdf2e4beb730978a025be66f8b342eb205020739aad88248e1928a66e0e117a3f7bafa553f2db8089b10a6fca22e0bfbdf54 WHIRLPOOL ab5226903f47c7372580a88df762d13dfbd8bea4299371e75c8b0bfbbd220cb07b2c0bafbc0ccf277b9e937f1448cdf1e91b2e44a7699db1b90469dc9a10086e

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 DIST votca-csg-tutorials-1.3.tar.gz 7602622 SHA256 ff6ea92b38b41850f2f92ef7533c1365ec6e6cff15d847eace953d7380777654 SHA512 34788d89fe6e989c91bbbb92887942d774b826d30a6423d539c32065ee8cd6a1adad9a2c4f34fa280c26c2342bf007a35019e6bdd0321dfd7a8f13458c7801a3 WHIRLPOOL e28f33294a5e2a432ef62812243f5bc36cb10a261b09b7bb08267a3da14cd601d7c1835264e1390eebc899f54aad8f12c2880a1a2bb5555681c2f89995672275

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+DIST votca-csg-tutorials-1.4_rc1.tar.gz 5710620 SHA256 f513fa46b882fad7a71235191d86899906b4cde4d0938b392162bb69a7c22dfd SHA512 ad360e18e68910ceef0c4d85bb1d7633ab68c462d49551b7ce93208145beaf19e40f492c3cd3e6255bc41c9ad7d6739c1c725c9cdf62235e3ba483d84fefd1db WHIRLPOOL 878e333877a0280bf47aecceb99472ad4fd129bde69c4faabaf9695b47d81c6030233f9932e246cd3aa74674609dc1b8c58e4e6064d7c460dcfa4d4b15e4c6fc

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diff --git a/sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild b/sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild

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new file mode 100644

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index 00000000..1b619ba

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--- /dev/null

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+++ b/sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild

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@@ -0,0 +1,114 @@

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+# Copyright 1999-2016 Gentoo Foundation

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+# Distributed under the terms of the GNU General Public License v2

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+# $Id$

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+

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+EAPI=6

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+

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+CMAKE_MAKEFILE_GENERATOR="ninja"

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+

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+inherit bash-completion-r1 cmake-utils multilib

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+

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+IUSE="doc examples extras +gromacs hdf5"

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+PDEPEND="extras? ( =sci-chemistry/${PN}apps-${PV} )"

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+if [ "${PV}" != "9999" ]; then

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+	SRC_URI="https://github.com/${PN/-//}/archive/v${PV}.tar.gz -> ${P}.tar.gz

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+		doc? ( https://github.com/${PN/-//}-manual/releases/download/v${PV}/${PN}-manual-${PV}.pdf )

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+		examples? (	https://github.com/${PN/-//}-tutorials/archive/v${PV}.tar.gz -> ${PN}-tutorials-${PV}.tar.gz )"

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+	KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-macos"

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+	S="${WORKDIR}/${P#votca-}"

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+else

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+	inherit git-r3

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+	EGIT_REPO_URI="git://github.com/${PN/-//}.git https://github.com/${PN/-//}.git"

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+	KEYWORDS=""

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+fi

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+

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+DESCRIPTION="Votca coarse-graining engine"

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+HOMEPAGE="http://www.votca.org"

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+

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+LICENSE="Apache-2.0"

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+SLOT="0"

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+

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+RDEPEND="

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+	=sci-libs/votca-tools-${PV}

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+	gromacs? ( sci-chemistry/gromacs:= )

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+	hdf5? ( sci-libs/hdf5 )

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+	dev-lang/perl

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+	app-shells/bash:*"

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+

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+DEPEND="${RDEPEND}

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+	doc? (

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+		app-doc/doxygen[dot]

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+		dev-texlive/texlive-latexextra

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+		virtual/latex-base

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+		dev-tex/pgf

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+	)

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+	>=app-text/txt2tags-2.5

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+	virtual/pkgconfig"

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+

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+DOCS=( README.md NOTICE CHANGELOG.md )

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+

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+src_unpack() {

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+	if [[ ${PV} != *9999 ]]; then

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+		default

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+	else

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+		git-r3_src_unpack

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+		if use doc; then

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+			EGIT_REPO_URI="git://github.com/${PN/-//}-manual.git https://github.com/${PN/-//}-manual.git"

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+			EGIT_BRANCH="master"

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+			EGIT_CHECKOUT_DIR="${WORKDIR}/${PN}-manual"\

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+				git-r3_src_unpack

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+		fi

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+		if use examples; then

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+			EGIT_REPO_URI="git://github.com/${PN/-//}-tutorials.git https://github.com/${PN/-//}-tutorials.git"

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+			EGIT_BRANCH="master"

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+			EGIT_CHECKOUT_DIR="${WORKDIR}/${PN#votca-}-tutorials"\

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+				git-r3_src_unpack

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+		fi

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+	fi

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+}

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+

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+src_configure() {

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+	mycmakeargs=(

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+		-DWITH_GMX=$(usex gromacs)

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+		-DWITH_H5MD=$(usex hdf5)

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+		-DWITH_RC_FILES=OFF

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+		-DLIB=$(get_libdir)

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+	)

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+	cmake-utils_src_configure

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+}

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+

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+src_install() {

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+	cmake-utils_src_install

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+	newbashcomp scripts/csg-completion.bash csg_call

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+	for i in "${ED}"/usr/bin/csg_*; do

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+		[[ ${i} = *csg_call ]] && continue

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+		bashcomp_alias csg_call "${i##*/}"

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+	done

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+	if use doc; then

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+		if [[ ${PV} = *9999* ]]; then

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+			#we need to do that here, because we need an installed version of csg to build the manual

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+			[[ ${CHOST} = *-darwin* ]] && \

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+				emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}${DYLD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)" \

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+				|| emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" LD_LIBRARY_PATH="${LD_LIBRARY_PATH}${LD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)"

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+			newdoc "${WORKDIR}/${PN}"-manual/manual.pdf "${PN}-manual-${PV}.pdf"

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+		else

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+			dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf"

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+		fi

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+		cmake-utils_src_make -C "${CMAKE_BUILD_DIR}" html

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+		dodoc -r "${CMAKE_BUILD_DIR}"/share/doc/html

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+	fi

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+	if use examples; then

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+		insinto "/usr/share/doc/${PF}/tutorials"

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+		docompress -x "/usr/share/doc/${PF}/tutorials"

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+		rm -rf "${WORKDIR}/${PN#votca-}"-tutorials*/CMake*

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+		doins -r "${WORKDIR}/${PN#votca-}"-tutorials*/*

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+	fi

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+}

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+

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+pkg_postinst() {

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+	einfo

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+	einfo "Please read and cite:"

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+	einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). "

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+	einfo "http://dx.doi.org/10.1021/ct900369w"

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+	einfo

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+}

1	commit: 2fb28aa6983f46e944d9f18cd7491ededc7e29a1
2	Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
3	AuthorDate: Tue Sep 27 16:29:34 2016 +0000
4	Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
5	CommitDate: Tue Sep 27 18:13:37 2016 +0000
6	URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2fb28aa6
7
8	sci-chemistry/votca-csg: version bump
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10	Package-Manager: portage-2.3.0
11
12	sci-chemistry/votca-csg/Manifest \| 3 +
13	sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild \| 114 +++++++++++++++++++++++
14	2 files changed, 117 insertions(+)
15
16	diff --git a/sci-chemistry/votca-csg/Manifest b/sci-chemistry/votca-csg/Manifest
17	index fb5ff9a..16da3c9 100644
18	--- a/sci-chemistry/votca-csg/Manifest
19	+++ b/sci-chemistry/votca-csg/Manifest
20	@@ -1,9 +1,12 @@
21	DIST votca-csg-1.2.4.tar.gz 188345 SHA256 375b428c90247a3877f71c2d96200969bcaf2b081b8c7332ac770720df43646a SHA512 da814154be6700b56509d899ea16a2f974fd951792c78f2f8717b39b0165fe19121fefb2ef9531c63a8d4558d15776058d24b13e0e7ad0abb9d7b11fac0f5d1a WHIRLPOOL 64a86b09ae00435c68bf09e960c1d1738648811fe2a9ffb18f5529d30d6f94ebf1fc218b14e1ee0bfc911e5ca1e92c25404be045cf28e16ced98fd7ee4421418
22	DIST votca-csg-1.3.1.tar.gz 242384 SHA256 608225256cf97552cf860cb3754f59a49c55d8433cff07440b8a252645e7bcb6 SHA512 fed4e164b9661d48fd8fa3f57c0a567b88ef2fe0a7a02cafba1d0b1d557529e5259161f558cae95117df8cae996c30486877c0e5aff96d1e8100341bfb674c20 WHIRLPOOL 553fa0b7fb2e142b984a5be6eff1a4e6e89ea2e78a3e7081441d88a498d2aa2bb5cd5e90456656713a646a7f82875fa79d7b9fa62c66ce9edc084f995f936c61
23	DIST votca-csg-1.3.tar.gz 242169 SHA256 eace2b90bcd9318ef257355daf09cbd15b10906c44af95d36454aa969a032cff SHA512 c1314672227feb361991b20cb1511473f23df1f0ff337ddc11319f2261ea19ac5c895de72d1da705026520483eebf1477462ea63275451c9fd1e6bbf4826bd76 WHIRLPOOL 2b48e19705fccc8b6af336536d90fdaf168bda05f327a688e604bd079a69b8b9b816d2d549e510659367e397229fbb433c7c406d462f809e0b4ae98c22a8b81b
24	+DIST votca-csg-1.4_rc1.tar.gz 346825 SHA256 ef13e1d75239cbfb1ef45927efbd1eb8135b0e616cd6e7f693187ffa2cde4eb7 SHA512 291fb5ce6b458fd8c1e7d30ad24d41a402c7794ce853db860d03148b53ae024925d36233e8b9e388e9e64819c3aba2a8dd89a3180a3fd1185dfdb93674df03e3 WHIRLPOOL 65cc9945ae7ba50184922cb375c0691c951152a918c7f79ce93758b54b8301c2faa497bb4960dd5e246085d1f965e633387905a4a293efb266231379466db794
25	DIST votca-csg-manual-1.2.4.pdf 1029132 SHA256 78a68955c96700d432249f712e0601376d5d61fef607860fe32d0ce0dcb70cff SHA512 66b7cf869b2b06d4133b341934fd013717b17c90426f4cdf637ef3bb6119e9f6b67cbde56b7f6b6c777dba9fb311df42dd34d8fe23331f1656439acb541d81bf WHIRLPOOL 629e0e6a8900bb7e4a96b7e1020f86ccacd5a7e7258a493d565c94986a0907371a37d45bf499517a74ad29cf2b606965746e0d90b6be91777f2b0a85f2781732
26	DIST votca-csg-manual-1.3.1.pdf 1266375 SHA256 320060a77739d3c9ca98116edde94468e136b4bbd38970b82c874eed30af4ee8 SHA512 3335309b364cebcba25269c39dc2383e663a6b46111b02120c63d408a6fd9c3361408beb528d664ce6e13311e5ebff4a4c2772cf2f0e668904b1d9e43030d321 WHIRLPOOL 04adb86ffb10e9e0ecd754ab29940468ec32ddd1f6de1796dd2e89a49e0b60df6a4ecbccab60a085e2619fab480bc63dbb4378490ccfc024c8335ceade983955
27	DIST votca-csg-manual-1.3.pdf 1266541 SHA256 1520f2c18972a2ec5e0a7e847ae294cee1e6fa5682010a314f2e45c264e59cec SHA512 eb5d88f6cba30d9fd8c3cb11cd6c08dd3e717fccdcbef11c3363d4eb36d23000d8bd7b448c0a5311bcaee2b502e50d7aadb0faf7c9a5e5e9c6e1e37b1e09ec7e WHIRLPOOL f411bdc929515594200a636e6f5e3338797ae35dfe8ba3ddb01913cea85973dccca6482a4aa276ce68689a8f7c4c6d47ae448f2e3ce549d3dba35a1d40eeb44d
28	+DIST votca-csg-manual-1.4_rc1.pdf 1268730 SHA256 4dc27fa2fb2300ceb0e7f601f0e0b3be91bfd20666126de80d5d977e1230bd11 SHA512 0e3d7ce8e7c63f24e13c099a70cfc30655e553ebdffe80731afcd7ae7f4c35d6c4a8976125e3b9f7dee01c8acc33b189c66096a056c6d70733fc970dd557ec5c WHIRLPOOL 0c7062d13a703117044b8779d8d4e4f207f274a2f7583ed2e8f753f3325c479aefc134ca2e5d9cecd2c1d5cab1e82a3b012593917513e8a5899652d502236a1b
29	DIST votca-csg-tutorials-1.2.4.tar.gz 3721034 SHA256 94b10f23f6e49c1279cdeea87dfee9c19b44373c74212340acebc06eb11e0245 SHA512 8d78a6ff02aedf97c2b640714fd7acfb7c4b0d03ec0141fa89f0ba041e1d2ec07477653d92effd4c96a6497271ad58f5c3397e1fc183c1c856285f6f8b5ceaf5 WHIRLPOOL ea0df816d2f26f12271250137b51f42ecc4a16eea622d37833d4dcc299732c413ee9f71a67767957b13ce8b44a96e9b1389bbbbdb66015c4b5c6d577d4483cf1
30	DIST votca-csg-tutorials-1.3.1.tar.gz 7602667 SHA256 7f283d14bec05cf617f1fb8026ee07af2bb1c517ea5a8526e2f318024cbf7069 SHA512 2475d8c8b40df1307c499387d352bdf2e4beb730978a025be66f8b342eb205020739aad88248e1928a66e0e117a3f7bafa553f2db8089b10a6fca22e0bfbdf54 WHIRLPOOL ab5226903f47c7372580a88df762d13dfbd8bea4299371e75c8b0bfbbd220cb07b2c0bafbc0ccf277b9e937f1448cdf1e91b2e44a7699db1b90469dc9a10086e
31	DIST votca-csg-tutorials-1.3.tar.gz 7602622 SHA256 ff6ea92b38b41850f2f92ef7533c1365ec6e6cff15d847eace953d7380777654 SHA512 34788d89fe6e989c91bbbb92887942d774b826d30a6423d539c32065ee8cd6a1adad9a2c4f34fa280c26c2342bf007a35019e6bdd0321dfd7a8f13458c7801a3 WHIRLPOOL e28f33294a5e2a432ef62812243f5bc36cb10a261b09b7bb08267a3da14cd601d7c1835264e1390eebc899f54aad8f12c2880a1a2bb5555681c2f89995672275
32	+DIST votca-csg-tutorials-1.4_rc1.tar.gz 5710620 SHA256 f513fa46b882fad7a71235191d86899906b4cde4d0938b392162bb69a7c22dfd SHA512 ad360e18e68910ceef0c4d85bb1d7633ab68c462d49551b7ce93208145beaf19e40f492c3cd3e6255bc41c9ad7d6739c1c725c9cdf62235e3ba483d84fefd1db WHIRLPOOL 878e333877a0280bf47aecceb99472ad4fd129bde69c4faabaf9695b47d81c6030233f9932e246cd3aa74674609dc1b8c58e4e6064d7c460dcfa4d4b15e4c6fc
33
34	diff --git a/sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild b/sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild
35	new file mode 100644
36	index 00000000..1b619ba
37	--- /dev/null
38	+++ b/sci-chemistry/votca-csg/votca-csg-1.4_rc1.ebuild
39	@@ -0,0 +1,114 @@
40	+# Copyright 1999-2016 Gentoo Foundation
41	+# Distributed under the terms of the GNU General Public License v2
42	+# $Id$
43	+
44	+EAPI=6
45	+
46	+CMAKE_MAKEFILE_GENERATOR="ninja"
47	+
48	+inherit bash-completion-r1 cmake-utils multilib
49	+
50	+IUSE="doc examples extras +gromacs hdf5"
51	+PDEPEND="extras? ( =sci-chemistry/${PN}apps-${PV} )"
52	+if [ "${PV}" != "9999" ]; then
53	+ SRC_URI="https://github.com/${PN/-//}/archive/v${PV}.tar.gz -> ${P}.tar.gz
54	+ doc? ( https://github.com/${PN/-//}-manual/releases/download/v${PV}/${PN}-manual-${PV}.pdf )
55	+ examples? ( https://github.com/${PN/-//}-tutorials/archive/v${PV}.tar.gz -> ${PN}-tutorials-${PV}.tar.gz )"
56	+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-macos"
57	+ S="${WORKDIR}/${P#votca-}"
58	+else
59	+ inherit git-r3
60	+ EGIT_REPO_URI="git://github.com/${PN/-//}.git https://github.com/${PN/-//}.git"
61	+ KEYWORDS=""
62	+fi
63	+
64	+DESCRIPTION="Votca coarse-graining engine"
65	+HOMEPAGE="http://www.votca.org"
66	+
67	+LICENSE="Apache-2.0"
68	+SLOT="0"
69	+
70	+RDEPEND="
71	+ =sci-libs/votca-tools-${PV}
72	+ gromacs? ( sci-chemistry/gromacs:= )
73	+ hdf5? ( sci-libs/hdf5 )
74	+ dev-lang/perl
75	+ app-shells/bash:*"
76	+
77	+DEPEND="${RDEPEND}
78	+ doc? (
79	+ app-doc/doxygen[dot]
80	+ dev-texlive/texlive-latexextra
81	+ virtual/latex-base
82	+ dev-tex/pgf
83	+ )
84	+ >=app-text/txt2tags-2.5
85	+ virtual/pkgconfig"
86	+
87	+DOCS=( README.md NOTICE CHANGELOG.md )
88	+
89	+src_unpack() {
90	+ if [[ ${PV} != *9999 ]]; then
91	+ default
92	+ else
93	+ git-r3_src_unpack
94	+ if use doc; then
95	+ EGIT_REPO_URI="git://github.com/${PN/-//}-manual.git https://github.com/${PN/-//}-manual.git"
96	+ EGIT_BRANCH="master"
97	+ EGIT_CHECKOUT_DIR="${WORKDIR}/${PN}-manual"\
98	+ git-r3_src_unpack
99	+ fi
100	+ if use examples; then
101	+ EGIT_REPO_URI="git://github.com/${PN/-//}-tutorials.git https://github.com/${PN/-//}-tutorials.git"
102	+ EGIT_BRANCH="master"
103	+ EGIT_CHECKOUT_DIR="${WORKDIR}/${PN#votca-}-tutorials"\
104	+ git-r3_src_unpack
105	+ fi
106	+ fi
107	+}
108	+
109	+src_configure() {
110	+ mycmakeargs=(
111	+ -DWITH_GMX=$(usex gromacs)
112	+ -DWITH_H5MD=$(usex hdf5)
113	+ -DWITH_RC_FILES=OFF
114	+ -DLIB=$(get_libdir)
115	+ )
116	+ cmake-utils_src_configure
117	+}
118	+
119	+src_install() {
120	+ cmake-utils_src_install
121	+ newbashcomp scripts/csg-completion.bash csg_call
122	+ for i in "${ED}"/usr/bin/csg_*; do
123	+ [[ ${i} = *csg_call ]] && continue
124	+ bashcomp_alias csg_call "${i##*/}"
125	+ done
126	+ if use doc; then
127	+ if [[ ${PV} = 9999 ]]; then
128	+ #we need to do that here, because we need an installed version of csg to build the manual
129	+ [[ ${CHOST} = -darwin ]] && \
130	+ emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}${DYLD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)" \
131	+ \|\| emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" LD_LIBRARY_PATH="${LD_LIBRARY_PATH}${LD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)"
132	+ newdoc "${WORKDIR}/${PN}"-manual/manual.pdf "${PN}-manual-${PV}.pdf"
133	+ else
134	+ dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf"
135	+ fi
136	+ cmake-utils_src_make -C "${CMAKE_BUILD_DIR}" html
137	+ dodoc -r "${CMAKE_BUILD_DIR}"/share/doc/html
138	+ fi
139	+ if use examples; then
140	+ insinto "/usr/share/doc/${PF}/tutorials"
141	+ docompress -x "/usr/share/doc/${PF}/tutorials"
142	+ rm -rf "${WORKDIR}/${PN#votca-}"-tutorials/CMake
143	+ doins -r "${WORKDIR}/${PN#votca-}"-tutorials/
144	+ fi
145	+}
146	+
147	+pkg_postinst() {
148	+ einfo
149	+ einfo "Please read and cite:"
150	+ einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). "
151	+ einfo "http://dx.doi.org/10.1021/ct900369w"
152	+ einfo
153	+}

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