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jlec 12/07/09 17:55:41 |
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|
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Modified: ChangeLog |
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Added: allpathslg-42337.ebuild |
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Log: |
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sci-biology/allpathslg: Version bump, fix compilation errors with gcc-4.7, #425472 |
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|
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(Portage version: 2.2.0_alpha116/cvs/Linux x86_64) |
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|
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Revision Changes Path |
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1.8 sci-biology/allpathslg/ChangeLog |
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|
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.8&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.8&content-type=text/plain |
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diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?r1=1.7&r2=1.8 |
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|
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v |
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retrieving revision 1.7 |
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retrieving revision 1.8 |
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diff -u -r1.7 -r1.8 |
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--- ChangeLog 29 May 2012 02:51:11 -0000 1.7 |
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+++ ChangeLog 9 Jul 2012 17:55:40 -0000 1.8 |
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@@ -1,6 +1,11 @@ |
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# ChangeLog for sci-biology/allpathslg |
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# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.7 2012/05/29 02:51:11 weaver Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.8 2012/07/09 17:55:40 jlec Exp $ |
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+ |
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+*allpathslg-42337 (09 Jul 2012) |
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+ |
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+ 09 Jul 2012; Justin Lecher <jlec@g.o> +allpathslg-42337.ebuild: |
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+ Version bump, fix compilation errors with gcc-4.7, #425472 |
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|
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*allpathslg-41839 (29 May 2012) |
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|
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|
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|
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|
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1.1 sci-biology/allpathslg/allpathslg-42337.ebuild |
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|
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-42337.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-42337.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: allpathslg-42337.ebuild |
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=================================================================== |
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# Copyright 1999-2012 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-42337.ebuild,v 1.1 2012/07/09 17:55:40 jlec Exp $ |
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|
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EAPI=4 |
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|
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inherit autotools flag-o-matic |
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|
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DESCRIPTION="De novo assembly of whole-genome shotgun microreads" |
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HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" |
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SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz" |
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|
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LICENSE="as-is" |
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SLOT="0" |
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IUSE="" |
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KEYWORDS="~amd64" |
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|
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DEPEND="dev-libs/boost |
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>=sys-devel/gcc-4.3.3 |
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sci-biology/vaal" |
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RDEPEND="" |
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|
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src_prepare() { |
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sed -i 's/-ggdb3//' configure.ac || die |
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eautoreconf |
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} |
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|
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src_install() { |
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einstall || die |
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# Provided by sci-biology/vaal |
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for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do |
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rm "${D}/usr/bin/$i" || die |
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done |
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} |
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