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commit: 3500e988a9231e0bb79e3de3daaf48ac1e7d1d9a |
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Author: Martin Mokrejš <mmokrejs <AT> gmail <DOT> com> |
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AuthorDate: Thu Aug 29 15:34:26 2013 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Thu Aug 29 15:34:26 2013 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3500e988 |
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|
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New package for FASTA/FASTQ preprocessing |
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|
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--- |
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sci-biology/fastx_toolkit/ChangeLog | 10 +++++++++ |
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.../fastx_toolkit/fastx_toolkit-0.0.13.2.ebuild | 26 ++++++++++++++++++++++ |
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2 files changed, 36 insertions(+) |
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|
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diff --git a/sci-biology/fastx_toolkit/ChangeLog b/sci-biology/fastx_toolkit/ChangeLog |
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new file mode 100644 |
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index 0000000..907109e |
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--- /dev/null |
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+++ b/sci-biology/fastx_toolkit/ChangeLog |
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@@ -0,0 +1,10 @@ |
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+# ChangeLog for sci-biology/fastx_toolkit |
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+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: $ |
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+ |
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+*fastx_toolkit-0.0.13.2 (29 Aug 2013) |
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+ |
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+ 29 Aug 2013; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> |
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+ +fastx_toolkit-0.0.13.2.ebuild: |
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+ New package for FASTA/FASTQ preprocessing. |
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+ |
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|
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diff --git a/sci-biology/fastx_toolkit/fastx_toolkit-0.0.13.2.ebuild b/sci-biology/fastx_toolkit/fastx_toolkit-0.0.13.2.ebuild |
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new file mode 100644 |
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index 0000000..ed24005 |
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--- /dev/null |
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+++ b/sci-biology/fastx_toolkit/fastx_toolkit-0.0.13.2.ebuild |
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@@ -0,0 +1,26 @@ |
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+# Copyright 1999-2013 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=3 |
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+ |
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+DESCRIPTION="Tools for Short Read FASTA/FASTQ file processing" |
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+HOMEPAGE="http://hannonlab.cshl.edu/fastx_toolkit" |
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+SRC_URI="http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit-"${PV}".tar.bz2" |
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+ |
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+LICENSE="AGPL-3" |
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+SLOT="0" |
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+KEYWORDS="~amd64 ~x86" |
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+IUSE="" |
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+ |
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+DEPEND=">=sci-biology/libgtextutils-0.6.1" |
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+RDEPEND="${DEPEND} |
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+ dev-perl/PerlIO-gzip |
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+ dev-perl/GDGraph |
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+ sys-apps/sed |
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+ sci-visualization/gnuplot" |
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+ |
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+src_install(){ |
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+ emake install DESTDIR="${D}" |
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+} |
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+ |