Gentoo Archives: gentoo-commits

From: "Andrey Kislyuk (weaver)" <weaver@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/plink: ChangeLog plink-1.06.ebuild plink-1.05.ebuild
Date: Sun, 21 Jun 2009 14:58:15
Message-Id: E1MIOUn-000169-9U@stork.gentoo.org
1 weaver 09/06/21 14:58:13
2
3 Modified: ChangeLog
4 Added: plink-1.06.ebuild
5 Removed: plink-1.05.ebuild
6 Log:
7 Version bump, change name to follow Debian, and drop old files
8 (Portage version: 2.2_rc30/cvs/Linux x86_64)
9
10 Revision Changes Path
11 1.2 sci-biology/plink/ChangeLog
12
13 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/ChangeLog?rev=1.2&view=markup
14 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/ChangeLog?rev=1.2&content-type=text/plain
15 diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/ChangeLog?r1=1.1&r2=1.2
16
17 Index: ChangeLog
18 ===================================================================
19 RCS file: /var/cvsroot/gentoo-x86/sci-biology/plink/ChangeLog,v
20 retrieving revision 1.1
21 retrieving revision 1.2
22 diff -u -r1.1 -r1.2
23 --- ChangeLog 7 Mar 2009 04:37:27 -0000 1.1
24 +++ ChangeLog 21 Jun 2009 14:58:13 -0000 1.2
25 @@ -1,6 +1,12 @@
26 # ChangeLog for sci-biology/plink
27 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
28 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/plink/ChangeLog,v 1.1 2009/03/07 04:37:27 weaver Exp $
29 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/plink/ChangeLog,v 1.2 2009/06/21 14:58:13 weaver Exp $
30 +
31 +*plink-1.06 (21 Jun 2009)
32 +
33 + 21 Jun 2009; Andrey Kislyuk <weaver@g.o>
34 + -files/plink-1.05-gcc43.patch, -plink-1.05.ebuild, +plink-1.06.ebuild:
35 + Version bump, change name to follow Debian, and drop old files
36
37 06 Mar 2009; Andrey Kislyuk <weaver@g.o> ChangeLog:
38 New package, ebuild written by Neil Shephard <nshephard@×××××.com> and me
39
40
41
42 1.1 sci-biology/plink/plink-1.06.ebuild
43
44 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/plink-1.06.ebuild?rev=1.1&view=markup
45 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/plink/plink-1.06.ebuild?rev=1.1&content-type=text/plain
46
47 Index: plink-1.06.ebuild
48 ===================================================================
49 # Copyright 1999-2009 Gentoo Foundation
50 # Distributed under the terms of the GNU General Public License v2
51 # $Header: /var/cvsroot/gentoo-x86/sci-biology/plink/plink-1.06.ebuild,v 1.1 2009/06/21 14:58:13 weaver Exp $
52
53 EAPI="2"
54
55 DESCRIPTION="Whole genome association analysis toolset"
56 HOMEPAGE="http://pngu.mgh.harvard.edu/~purcell/plink/"
57 SRC_URI="http://pngu.mgh.harvard.edu/~purcell/plink/dist/${P}-src.zip"
58
59 LICENSE="GPL-2"
60 SLOT="0"
61 IUSE="-webcheck"
62 KEYWORDS="~x86 ~amd64"
63
64 DEPEND="app-arch/unzip"
65 RDEPEND=""
66
67 S="${WORKDIR}/${P}-src"
68
69 # Package collides with net-misc/putty. Renamed to p-link following discussion with Debian.
70 # Package contains bytecode-only jar gPLINK.jar. Ignored, notified upstream.
71
72 src_prepare() {
73 sed -i -e '/CXXFLAGS =/ s/^/#/' -e 's/-static//' "${S}/Makefile" || die
74 use webcheck || sed -i '/WITH_WEBCHECK =/ s/^/#/' "${S}/Makefile" || die
75 }
76
77 src_install() {
78 newbin plink p-link || die
79 dodoc README.txt
80 }