[gentoo-commits] proj/sci:master commit in: sci-libs/itk/

[Justin Lecher]

commit:     039697bf6b87b07578ac626d015e71bc38901722
Author:     tharvik <tharvik <AT> users <DOT> noreply <DOT> github <DOT> com>
AuthorDate: Sun Jun 18 22:31:57 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jun 23 09:11:41 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=039697bf

sci-libs/itk: bump to 4.12.0

Package-Manager: Portage-2.3.5, Repoman-2.3.1
Closes: https://github.com/gentoo/sci/pull/792

 sci-libs/itk/itk-4.12.0.ebuild | 136 +++++++++++++++++++++++++++++++++++++++++
 1 file changed, 136 insertions(+)

diff --git a/sci-libs/itk/itk-4.12.0.ebuild b/sci-libs/itk/itk-4.12.0.ebuild
new file mode 100644
index 000000000..a9633748b
--- /dev/null
+++ b/sci-libs/itk/itk-4.12.0.ebuild
@@ -0,0 +1,136 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit eutils toolchain-funcs cmake-utils python-single-r1
+
+MYPN=InsightToolkit
+MYP=${MYPN}-${PV}
+DOC_PV=4.5.0
+
+DESCRIPTION="NLM Insight Segmentation and Registration Toolkit"
+HOMEPAGE="http://www.itk.org"
+SRC_URI="mirror://sourceforge/${PN}/${MYP}.tar.xz
+	doc? ( mirror://sourceforge/${PN}/Doxygen${MYPN}-${DOC_PV}.tar.gz )"
+RESTRICT="primaryuri"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="debug doc examples +fftw itkv3compat python review cpu_flags_x86_sse2 test vtkglue"
+
+RDEPEND="
+	dev-libs/double-conversion:0=
+	media-libs/libpng:0=
+	media-libs/tiff:0=
+	sci-libs/dcmtk:0=
+	sci-libs/hdf5:0=[cxx]
+	sys-libs/zlib:0=
+	virtual/jpeg:0=
+	fftw? ( sci-libs/fftw:3.0= )
+	vtkglue? ( sci-libs/vtk:0=[python?] )
+"
+DEPEND="${RDEPEND}
+	python? (
+		${PYTHON_DEPS}
+		>=dev-lang/swig-2.0:0
+		>=dev-cpp/gccxml-0.9.0_pre20120309
+	)
+	doc? ( app-doc/doxygen )
+"
+
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
+
+S="${WORKDIR}/${MYP}"
+
+PATCHES=(
+	"${FILESDIR}/nrrdio-linking.patch"
+)
+
+get_memory() {
+	free --giga | grep Mem | cut -d ' ' -f 15 || die 'unable to get memory size'
+}
+
+src_configure() {
+	sed -i \
+		-e '/find_package/d' \
+		Modules/ThirdParty/DoubleConversion/CMakeLists.txt || die
+
+	local mycmakeargs=(
+		-DBUILD_SHARED_LIBS=ON
+		-DITK_USE_SYSTEM_DCMTK=ON
+		-DITK_USE_SYSTEM_DOUBLECONVERSION=ON
+		-DITK_USE_SYSTEM_HDF5=ON
+		-DITK_USE_SYSTEM_JPEG=ON
+		-DITK_USE_SYSTEM_PNG=ON
+		-DITK_USE_SYSTEM_SWIG=ON
+		-DITK_USE_SYSTEM_TIFF=ON
+		-DITK_USE_SYSTEM_ZLIB=ON
+		-DITK_BUILD_DEFAULT_MODULES=ON
+		-DITK_COMPUTER_MEMORY_SIZE="$(get_memory)"
+		-DITK_WRAP_JAVA=OFF
+		-DITK_WRAP_TCL=OFF
+		-DBUILD_TESTING=$(usex test)
+		-DBUILD_EXAMPLES=$(usex examples)
+		-DITK_USE_REVIEW=$(usex review)
+		-DITKV3_COMPATIBILITY=$(usex itkv3compat)
+		-DVNL_CONFIG_ENABLE_SSE2=$(usex cpu_flags_x86_sse2)
+	)
+	if use fftw; then
+		mycmakeargs+=(
+			-DUSE_FFTWD=ON
+			-DUSE_FFTWF=ON
+			-DUSE_SYSTEM_FFTW=ON
+			-DITK_USE_SYSTEM_FFTW=ON
+			-DITK_WRAPPING=ON
+			-DITK_WRAP_double=ON
+			-DITK_WRAP_vector_double=ON
+			-DITK_WRAP_covariant_vector_double=ON
+			-DITK_WRAP_complex_double=ON
+		)
+	fi
+	if use vtkglue; then
+		mycmakeargs+=(
+			-DModule_ITKVtkGlue=ON
+		)
+	fi
+	mycmakeargs+=(
+		-DITK_WRAP_PYTHON=$(usex python ON OFF)
+	)
+
+	cmake-utils_src_configure
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	if use examples; then
+		insinto /usr/share/doc/${PF}/examples
+		docompress -x /usr/share/doc/${PF}/examples
+		doins -r "${S}"/Examples/*
+	fi
+
+	echo "ITK_DATA_ROOT=${EROOT%/}/usr/share/${PN}/data" > ${T}/40${PN}
+	local ldpath="${EROOT%/}/usr/$(get_libdir)/InsightToolkit"
+	if use python; then
+		echo "PYTHONPATH=${EROOT%/}/usr/$(get_libdir)/InsightToolkit/WrapITK/Python" >> "${T}"/40${PN}
+		ldpath="${ldpath}:${EROOT%/}/usr/$(get_libdir)/InsightToolkit/WrapITK/lib"
+	fi
+	echo "LDPATH=${ldpath}" >> "${T}"/40${PN}
+	doenvd "${T}"/40${PN}
+
+	if use doc; then
+		insinto /usr/share/doc/${PF}/api-docs
+		cd "${WORKDIR}"/html
+		rm  *.md5 || die "Failed to remove superfluous hashes"
+		einfo "Installing API docs. This may take some time."
+		insinto /usr/share/doc/${PF}/api-docs
+		doins -r *
+	fi
+
+	mv "${D}/usr/lib" "${D}/usr/$(get_libdir)" || \
+		die 'unable to fix libdir'
+}