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commit: e506aabb717f6536e683c88a998e7b566aab8164 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Mon Jan 8 14:11:10 2018 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Mon Jan 8 14:11:10 2018 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e506aabb |
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|
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sci-biology/BRAKER: version bump |
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Package-Manager: Portage-2.3.19, Repoman-2.3.6 |
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sci-biology/BRAKER/{BRAKER-1.9.ebuild => BRAKER-2.ebuild} | 6 +++--- |
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1 file changed, 3 insertions(+), 3 deletions(-) |
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diff --git a/sci-biology/BRAKER/BRAKER-1.9.ebuild b/sci-biology/BRAKER/BRAKER-2.ebuild |
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similarity index 89% |
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rename from sci-biology/BRAKER/BRAKER-1.9.ebuild |
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rename to sci-biology/BRAKER/BRAKER-2.ebuild |
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index 7c814763f..b4c752457 100644 |
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--- a/sci-biology/BRAKER/BRAKER-1.9.ebuild |
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+++ b/sci-biology/BRAKER/BRAKER-2.ebuild |
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@@ -1,4 +1,4 @@ |
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-# Copyright 1999-2016 Gentoo Foundation |
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+# Copyright 1999-2018 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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|
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EAPI=5 |
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@@ -10,7 +10,7 @@ DESCRIPTION="Gene prediction based on RNA-Seq using GeneMark-ET and AUGUSTUS" |
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# http://bioinf.uni-greifswald.de/bioinf/publications/pag2015.pdf |
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HOMEPAGE="http://bioinf.uni-greifswald.de/bioinf/braker |
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http://bioinf.uni-greifswald.de/augustus/downloads" |
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-SRC_URI=" http://bioinf.uni-greifswald.de/augustus/binaries/BRAKER1_v"${PV}".tar.gz -> ${P}.tar.gz" |
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+SRC_URI="http://bioinf.uni-greifswald.de/augustus/binaries/BRAKER"${PV}".tar.gz -> ${P}.tar.gz" |
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# Download BRAKER1 from http://bioinf.uni-greifswald.de/augustus/binaries/BRAKER1.tar.gz. |
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# The most recent release is version 1.8, from December 15th 2015. |
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# Example data for testing the BRAKER1 pipeline is available at |
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@@ -31,7 +31,7 @@ RDEPEND="${DEPEND} |
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# this causes: |
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# [blocks B ] <perl-core/Scalar-List-Utils-1.380.0 ("<perl-core/Scalar-List-Utils-1.380.0" is blocking virtual/perl-Scalar-List-Utils-1.380.0) |
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-S="${WORKDIR}"/BRAKER_v"${PV}" |
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+S="${WORKDIR}"/BRAKER_v"${PV}".0 |
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|
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src_prepare(){ |
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sed -e 's/^use helpMod/use BRAKER::helpMod/' -i braker.pl || die |
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