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commit: e2350d45cb2a9a588fcaa54b388e81a55a8387b0 |
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Author: David Seifert <soap <AT> gentoo <DOT> org> |
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AuthorDate: Mon Aug 3 16:54:38 2020 +0000 |
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Commit: David Seifert <soap <AT> gentoo <DOT> org> |
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CommitDate: Mon Aug 3 16:54:38 2020 +0000 |
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URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e2350d45 |
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|
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sci-biology/HTSeq: Remove old |
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|
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* Remove the package.mask entry again |
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|
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Closes: https://bugs.gentoo.org/696484 |
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Closes: https://bugs.gentoo.org/718466 |
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Package-Manager: Portage-3.0.1, Repoman-2.3.23 |
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Signed-off-by: David Seifert <soap <AT> gentoo.org> |
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|
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profiles/package.mask | 5 ----- |
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sci-biology/HTSeq/HTSeq-0.9.1.ebuild | 31 ------------------------------- |
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sci-biology/HTSeq/Manifest | 1 - |
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3 files changed, 37 deletions(-) |
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|
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diff --git a/profiles/package.mask b/profiles/package.mask |
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index d16ad6bb931..a68364008b4 100644 |
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--- a/profiles/package.mask |
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+++ b/profiles/package.mask |
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@@ -93,11 +93,6 @@ sys-fs/ecryptfs-utils |
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# Removal in 30 days |
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www-misc/nx_util |
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|
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-# Aaron Bauman <bman@g.o> (2020-08-02) |
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-# Unmaintained. New release upstream. Py3.6 only. |
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-# Removal in 30 days. Bug #696484,#718466 |
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-sci-biology/HTSeq |
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- |
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# Aaron Bauman <bman@g.o> (2020-08-02) |
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# Dead upstream. Py3.6 only. Build issues. |
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# Removal in 30 days. Bug #677900,#716384 |
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|
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diff --git a/sci-biology/HTSeq/HTSeq-0.9.1.ebuild b/sci-biology/HTSeq/HTSeq-0.9.1.ebuild |
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deleted file mode 100644 |
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index 18a07a7b9f9..00000000000 |
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--- a/sci-biology/HTSeq/HTSeq-0.9.1.ebuild |
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+++ /dev/null |
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@@ -1,31 +0,0 @@ |
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-# Copyright 1999-2020 Gentoo Authors |
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-# Distributed under the terms of the GNU General Public License v2 |
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- |
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-EAPI=6 |
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- |
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-PYTHON_COMPAT=( python3_6 ) |
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- |
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-inherit distutils-r1 |
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- |
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-DESCRIPTION="Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files" |
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-HOMEPAGE="https://htseq.readthedocs.io/" |
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- |
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-if [[ ${PV} == *9999 ]]; then |
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- inherit git-r3 |
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- EGIT_REPO_URI="https://github.com/simon-anders/htseq.git" |
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-else |
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- SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" |
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- KEYWORDS="~amd64" |
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-fi |
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- |
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-LICENSE="GPL-3+" |
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-SLOT="0" |
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- |
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-RDEPEND=" |
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- dev-python/numpy[${PYTHON_USEDEP}] |
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- dev-python/matplotlib[${PYTHON_USEDEP}] |
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- sci-biology/pysam[${PYTHON_USEDEP}]" |
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-DEPEND=" |
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- ${RDEPEND} |
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- >=dev-lang/swig-3.0.8 |
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- dev-python/cython[${PYTHON_USEDEP}]" |
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|
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diff --git a/sci-biology/HTSeq/Manifest b/sci-biology/HTSeq/Manifest |
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index bc4ffd5f360..92258c60174 100644 |
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--- a/sci-biology/HTSeq/Manifest |
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+++ b/sci-biology/HTSeq/Manifest |
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@@ -1,2 +1 @@ |
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DIST HTSeq-0.12.4.tar.gz 36187218 BLAKE2B 27be4e8783f9e32c10e23ae812069b489eb11dfa4058db43b5db4b8089792351901255103e4d4de1bcf866da3acd13e742adf8d35a9b70305aa156c70dde0837 SHA512 ec4a1a7e9177f103465840ffa9f936a5e887ffd17760b99d4cbdfd5a88e2ab44275fadfcbee153aadc6e828de7be205ed7a07f3a0548457b7c66826341c3ca64 |
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-DIST HTSeq-0.9.1.tar.gz 596941 BLAKE2B 6865c36056bff2008ae8bf18d0ac81dbf721fb97cdcc8bbd9150356fc80ae99e0cb872033fac274b40df3d1c95e9bcfd83c4f7d033184725596ffc96081e26d1 SHA512 ec3e1ec9cf66918f2afacf7997ab5da02015896ddd97260f5abec8343a9013cf6e857872be38b2cd3bb5bde655abe602a3c22c32448190f32e1a8f1153a19344 |