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commit: 9f27b14c96909e5d20a115874ee3e5d93d536311 |
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Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Fri May 6 11:55:38 2011 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Fri May 6 11:55:38 2011 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9f27b14c |
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|
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sci-biology/Gambit: BAM file viewer |
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|
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(Portage version: 2.1.9.43/git/Linux i686, unsigned Manifest commit) |
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|
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--- |
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sci-biology/Gambit/Gambit-0.4.145.ebuild | 35 ++++++++++++++++++++++++++++++ |
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sci-biology/Gambit/metadata.xml | 9 +++++++ |
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2 files changed, 44 insertions(+), 0 deletions(-) |
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|
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diff --git a/sci-biology/Gambit/Gambit-0.4.145.ebuild b/sci-biology/Gambit/Gambit-0.4.145.ebuild |
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new file mode 100644 |
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index 0000000..ebc5f62 |
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--- /dev/null |
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+++ b/sci-biology/Gambit/Gambit-0.4.145.ebuild |
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@@ -0,0 +1,35 @@ |
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+# Copyright 1999-2011 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=3 |
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+ |
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+inherit qt4-r2 |
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+ |
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+DESCRIPTION="Display genomic alignments from BAM files with annotations from BED, GFF, GFF3, VCF formats" |
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+HOMEPAGE="http://code.google.com/p/gambit-viewer/" |
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+SRC_URI="http://gambit-viewer.googlecode.com/files/Gambit_v0.4.145_src.tar.gz |
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+ http://gambit-viewer.googlecode.com/files/GambitDocumentation_v0.4.145.pdf" |
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+ |
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+LICENSE="GPL-2" |
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+SLOT="0" |
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+KEYWORDS="~amd64 ~x86" |
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+IUSE="" |
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+ |
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+DEPEND="x11-libs/qt-core:4 |
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+ x11-libs/qt-gui:4" |
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+RDEPEND="${DEPEND} |
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+ sci-biology/samtools" |
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+ |
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+S="${WORKDIR}"/Gambit |
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+ |
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+src_configure() { |
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+ lupdate ${PN}.pro || die |
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+ lrelease ${PN}.pro || die |
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+ eqmake4 ${PN}.pro || die |
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+} |
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+ |
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+src_install() { |
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+ dobin ${PN} || die |
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+ dodoc "${DISTDIR}"/GambitDocumentation_v0.4.145.pdf |
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+} |
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|
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diff --git a/sci-biology/Gambit/metadata.xml b/sci-biology/Gambit/metadata.xml |
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new file mode 100644 |
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index 0000000..07b5255 |
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--- /dev/null |
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+++ b/sci-biology/Gambit/metadata.xml |
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@@ -0,0 +1,9 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <herd>sci-biology</herd> |
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+ <maintainer> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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