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commit: 51323d9c686f7a9bd5ec8b04d003353f8829e520 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Mon Aug 1 12:43:09 2016 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Mon Aug 1 12:43:09 2016 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=51323d9c |
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|
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sci-biology/ensembl-tools: add more dependencies |
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|
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Package-Manager: portage-2.3.0 |
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|
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sci-biology/ensembl-tools/ensembl-tools-85.ebuild | 6 ++++-- |
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1 file changed, 4 insertions(+), 2 deletions(-) |
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|
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diff --git a/sci-biology/ensembl-tools/ensembl-tools-85.ebuild b/sci-biology/ensembl-tools/ensembl-tools-85.ebuild |
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index 0ed40bb..ffa1b63 100644 |
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--- a/sci-biology/ensembl-tools/ensembl-tools-85.ebuild |
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+++ b/sci-biology/ensembl-tools/ensembl-tools-85.ebuild |
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@@ -17,7 +17,8 @@ SLOT="0" |
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KEYWORDS="" # BUG: needs Bio::EnsEMBL::Registry |
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IUSE="" |
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|
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-DEPEND="" |
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+DEPEND="dev-perl/File-Copy-Recursive |
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+ dev-perl/Archive-Extract" |
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#DEPEND="dev-perl/Perl-XS |
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# dev-perl/Bio-DB-HTS" |
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RDEPEND="${DEPEND}" |
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@@ -28,7 +29,8 @@ src_install(){ |
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perl_set_version |
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insinto ${VENDOR_LIB}/${PN} |
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cd scripts/variant_effect_predictor || die |
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- perl INSTALL.pl --DESTDIR="${EPREFIX}"/"${DESTDIR}" --AUTO ac |
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+ # FIXME: INSTALL.pl does not exit upon error |
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+ ./INSTALL.pl --DESTDIR="${DESTDIR}"/"${EPREFIX}" --AUTO=ac || die |
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newdoc README.txt variant_effect_predictor.txt |
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cd ../../scripts/region_reporter || die |
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dobin *.pl |