[gentoo-commits] repo/gentoo:master commit in: licenses/

[Michał Górny]

commit:     c0e54d2e217fba1c53cb772c8d3506312b35fdb4
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu May  2 22:03:37 2019 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu May  2 22:04:53 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c0e54d2e

licenses: Remove unused arb license

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 licenses/arb | 296 -----------------------------------------------------------
 1 file changed, 296 deletions(-)

diff --git a/licenses/arb b/licenses/arb
deleted file mode 100644
index b742625a8a3..00000000000
--- a/licenses/arb
+++ /dev/null
@@ -1,296 +0,0 @@
-Copyrights
-
-ARB copyright and license information
-
-    COPYRIGHTS
-
-        The ARB software and documentation are not in the public
-        domain.
-
-        External programs distributed together with ARB are
-        copyrighted by and are the property of their respective
-        authors unless otherwise stated.
-
-        All other copyrights are owned by Lehrstuhl fuer
-        Mikrobiologie, TU Muenchen.
-
-    USAGE LICENSE
-
-        You have the right to use this version of ARB for free.
-        Please read as well the attached copyright notices below
-        whether you may or may not install this package.
-
-        Since many of the included programs is free software and
-        nobody is allowed to sell that software you may safely assume
-        ARB will never become a commercial product.
-
-    REDISTRIBUTION LICENSE
-
-        This release of the ARB program and documentation may not be
-        sold or incorporated into a commercial product, in whole or in
-        part, without the expressed written consent of the Technical
-        University of Munich and of its supervisors Ralf Westram or
-        Wolfgang Ludwig.
-
-        All interested parties may redistribute and modify ARB as long
-        as all copies are accompanied by this license information and
-        all copyright notices remain intact.  Parties redistributing
-        ARB must do so on a non-profit basis, charging only for cost
-        of media or distribution.
-
-        If you modify parts of ARB and redistribute these changes the
-        'Lehrstuhl fuer Mikrobiologie' of the TU Muenchen gains the
-        right to incorporate these changes into ARB and to redistribute
-        them with future versions of ARB.
-
-    DEBIAN DISTRIBUTION
-
-        Hereby anybody is granted the right to build debian-pakets
-        of the ARB software package (http:://www.arb-home.de/) and
-        publish them on debian mirrors (or any other way of
-        debian-distribution).
-
-        This includes any debian derivates like ubuntu.
-
-        The ARB developers may (but most likely wont ever) revoke
-        this granting. If really done so, it'll only affect ARB
-        versions released after such a revocation.
-
-    DISCLAIMER
-
-        THE TU MUENCHEN AND THE VARIOUS AUTHORS OF ARB GIVE NO
-        WARRANTIES, EXPRESSED OR IMPLIED FOR THE SOFTWARE AND
-        DOCUMENTATION PROVIDED, INCLUDING, BUT NOT LIMITED TO WARRANTY
-        OF MERCHANTABILITY AND WARRANTY OF FITNESS FOR A PARTICULAR
-        PURPOSE.  User understands the software is a research tool for
-        which no warranties as to capabilities or accuracy are made,
-        and user accepts the software "as is." User assumes the entire
-        risk as to the results and performance of the software and
-        documentation. The above parties cannot be held liable for any
-        direct, indirect, consequential or incidental damages with
-        respect to any claim by user or any third party on account of,
-        or arising from the use of software and associated
-        materials. This disclaimer covers both the ARB core
-        applications and all external programs used by ARB.
-
-
-Copyright notices for programs distributes together with ARB
-
-    GDE
-
-        The Genetic Data Environment (GDE) software and documentation
-        are not in the public domain. Portions of this code are owned
-        and copyrighted by the The Board of Trustees of the University
-        of Illinois and by Steven Smith. External functions used by
-        GDE are the property of their authors. This release of the GDE
-        program and documentation may not be sold, or incorporated
-        into a commercial product, in whole or in part without the
-        expressed written consent of the University of Illinois and of
-        its author, Steven Smith.
-
-        All interested parties may redistribute the GDE as long as all
-        copies are accompanied by this documentation, and all
-        copyright notices remain intact.  Parties interested in
-        redistribution must do so on a non-profit basis, charging only
-        for cost of media.  Modifications to the GDE core editor
-        should be forwarded to the author Steven Smith.  External
-        programs used by the GDE are copyrighted by, and are the
-        property of their respective authors unless otherwise stated.
-
-
-
-    PHYLIP
-
-        (c) Copyright 1986-1993 by Joseph Felsenstein and the
-        University of Washington. Permission is granted to copy this
-        document provided that no fee is charged for it and that this
-        copyright notice is not removed.
-
-    LSADT
-
-        LEAST SQUARES ALGORITHM FOR FITTING ADDITIVE TREES TO
-        PROXIMITY DATA
-
-        GEERT DE SOETE  --  VERSION 1.01 - FEB. 1983
-                            VERSION 1.02 - JUNE 1983
-                            VERSION 1.03 - JULY 1983
-
-      - 'C' version by Michael Macuikenas, University of Illinois
-
-        REFERENCE: DE SOETE, G. A LEAST SQUARES ALGORITHM FOR FITTING
-           ADDITIVE TREES TO PROXIMITY DATA. PSYCHOMETRIKA, 1983, 48,
-           621-626.
-           DE SOETE, G. ADDITIVE TREE REPRESENTATIONS OF INCOMPLETE
-           DISSIMILARITY DATA. QUALITY AND QUANTITY, 1984, 18,
-           387-393.
-
-      - REMARKS
-
-            ------
-
-        1) THE PROGRAM USES SUBROUTINES FROM THE PORT LIBRARY FOR
-           ERROR HANDLING, DYNAMIC STORAGE ALLOCATION AND SPECIFICA-
-           TION OF MACHINE-DEPENDENT CONSTANTS.
-           CF. FOX, P.A., HALL, A.D., & SCHRYER, N.L.
-
-            THE PORT MATHEMATICAL SUBROUTINE LIBRAY. ACM TRANS. ON MATH.
-            SOFTW., 1978, 4, 104-126.
-
-                 ALGORITHM 528. FRAMEWORK FOR A PORTABLE LIBRARY.
-                 ACM TRANS. ON MATH. SOFTW., 1978, 4, 177-188.
-        2) UNIFORMLY DISTRIBUTED RANDOM NUMBERS ARE GENERATED BY A
-           PROCEDURE DUE TO SCHRAGE. CF.
-           SCHRAGE, L.  A MORE PORTABLE FORTRAN RANDOM NUMBER GENERATOR.
-           ACM TRANS. ON MATH. SOFTW., 1979, 5, 132-138.
-        3) SUBROUTINES VA14AD AND VA14AC ARE ADAPTED FROM THE
-           HARWELL SUBROUTINE LIBRARY (1979 EDITION).
-        4) ALTHOUGH THIS PROGRAM HAS BEEN CAREFULLY TESTED, THE
-           AUTHOR DISCLAIMS ANY RESPONSABILITY FOR POSSIBLE
-           ERRORS.
-
-    BLAST
-
-        /* ===========================================================================
-        *
-        *                            PUBLIC DOMAIN NOTICE
-        *               National Center for Biotechnology Information
-        *
-        *  This software/database is a "United States Government Work" under the
-        *  terms of the United States Copyright Act.  It was written as part of
-        *  the author's official duties as a United States Government employee and
-        *  thus cannot be copyrighted.  This software/database is freely available
-        *  to the public for use. The National Library of Medicine and the U.S.
-        *  Government have not placed any restriction on its use or reproduction.
-        *
-        *  Although all reasonable efforts have been taken to ensure the accuracy
-        *  and reliability of the software and data, the NLM and the U.S.
-        *  Government do not and cannot warrant the performance or results that
-        *  may be obtained by using this software or data. The NLM and the U.S.
-        *  Government disclaim all warranties, express or implied, including
-        *  warranties of performance, merchantability or fitness for any particular
-        *  purpose.
-        *
-        *  Please cite the author in any work or product based on this material.
-        *
-        * ===========================================================================*/
-        Warren Gish
-        NCBI/NLM
-
-    CONVERT_ALN
-
-        convert_aln --  an alignment(or sequence) converter written by Wen-Min Kuan
-                        for the Ribosomal Database Project(RDP), April 28, 1992.
-
-
-    fastdnaml
-
-        fastDNAml, a program for estimation of phylogenetic trees from
-        sequences. Copyright (C) 1998, 1999, 2000 by Gary J. Olsen
-
-        This program is free software; you may redistribute it and/or
-        modify it under the terms of the GNU General Public License as
-        published by the Free Software Foundation; either version 2 of
-        the License, or (at your option) any later version.
-
-        This program is distributed in the hope that it will be
-        useful, but WITHOUT ANY WARRANTY; without even the implied
-        warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
-        PURPOSE.  See the GNU General Public License for more details.
-
-        You should have received a copy of the GNU General Public License along
-        with this program; if not, write to the Free Software Foundation, Inc.,
-        59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
-
-        For any other enquiries write to Gary J. Olsen, Department of
-        Microbiology, University of Illinois, Urbana, IL 61801, USA
-
-        Or send E-mail to gary@×××××××××××××××.edu
-
-        fastDNAml is based in part on the program dnaml by Joseph Felsenstein.
-
-        Copyright notice from dnaml:
-
-            version 3.3. (c) Copyright 1986, 1990 by the University of
-            Washington and Joseph Felsenstein.  Written by Joseph
-            Felsenstein.  Permission is granted to copy and use this
-            program provided no fee is charged for it and provided
-            that this copyright notice is not removed.
-
-        When publishing work that based on results from fastDNAml please cite:
-
-            Felsenstein, J.  1981.  Evolutionary trees from DNA
-            sequences: A maximum likelihood approach.
-            J. Mol. Evol. 17: 368-376.
-
-            and
-
-            Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R.
-            1994.  fastDNAml: A tool for construction of phylogenetic
-            trees of DNA sequences using maximum likelihood.
-            Comput. Appl. Biosci. 10: 41-48.
-
-
-    treepuzzle
-
-        treepuzzle is published under the GPL (GNU GENERAL PUBLIC LICENSE)
-        which is provided in 'lib/GPL.txt'.
-
-    molphy
-
-        MOLPHY: A Computer Program Package for Molecular Phylogenetics
-
-        Readme
-               This is the MOLPHY (ProtML) distribution,  version 2.3.
-                Copyright (c) 1992-1996, Jun Adachi & Masami Hasegawa.
-                                 All rights reserved.
-
-                MOLPHY is a program package for MOLecular PHYlogenetics.
-
-        ProtML is a main program in MOLPHY for inferring evolutionary trees from
-        PROTein (amino acid) sequences by using the Maximum Likelihood method.
-
-        Programs (C language)
-          ProtML: Maximum Likelihood Inference of Protein Phylogeny
-          NucML:  Maximum Likelihood Inference of Nucleic Acid Phylogeny
-          ProtST: Basic Statistics of Protein Sequences
-          NucST:  Basic Statistics of Nucleic Acid Sequences
-          NJdist: Neighbor Joining Phylogeny from Distance Matrix
-        Utilities (Perl)
-          mollist:  get identifiers list        molrev:   reverse DNA sequences
-          molcat:   concatenate sequences       molcut:   get partial sequences
-          molmerge: merge sequences             nuc2ptn:  DNA -> Amino acid
-          rminsdel: remove INS/DEL sites        molcodon: get specified codon sites
-          molinfo:  get varied sites            mol2mol:  MOLPHY format beautifer
-          inl2mol:  Interleaved -> MOLPHY       mol2inl:  MOLPHY -> Interleaved
-          mol2phy:  MOLPHY -> Sequential        phy2mol:  Sequential -> MOLPHY
-          must2mol: MUST -> MOLPHY              etc.
-
-        MOLPHY is a free software, and you can use and redistribute it.
-        The programs are written in a standard subset of C with UNIX-like OS.
-        The utilities are written in the "Perl" (Ver.4.036) with UNIX-like OS.
-        MOLPHY has been tested on SUN4's (cc & gcc with SUN-OS 4.1.3) and
-        HP9000/700 (cc, c89 & gcc with HP-UX 9.05).
-        However, MOLPHY has NOT been tested on VAX, IBM-PC, and Macintosh.
-
-        NETWORK DISTRIBUTION ONLY: The latest version of MOLPHY is always available
-        by anonymous ftp in ftp.ism.ac.jp: /pub/ISMLIB/MOLPHY/.
-
-    readseq
-
-
-         ReadSeq  -- 1 Feb 93
-
-         Reads and writes nucleic/protein sequences in various
-         formats. Data files may have multiple sequences.
-
-         Copyright 1990 by d.g.gilbert
-         biology dept., indiana university, bloomington, in 47405
-         e-mail: gilbertd@×××××××××××.edu
-
-         This program may be freely copied and used by anyone.
-         Developers are encourged to incorporate parts in their
-         programs, rather than devise their own private sequence
-         format.
-
-         This should compile and run with any ANSI C compiler.
-         Please advise me of any bugs, additions or corrections.