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jlec 10/06/25 09:40:04 |
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|
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Modified: ChangeLog |
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Added: trnascan-se-1.23-r2.ebuild |
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Log: |
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Fixed test, #318641; multilib, LDFLAGS, PREFIX awareness |
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(Portage version: 2.2_rc67/cvs/Linux x86_64) |
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|
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Revision Changes Path |
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1.11 sci-biology/trnascan-se/ChangeLog |
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|
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/trnascan-se/ChangeLog?rev=1.11&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/trnascan-se/ChangeLog?rev=1.11&content-type=text/plain |
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diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/trnascan-se/ChangeLog?r1=1.10&r2=1.11 |
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|
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/ChangeLog,v |
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retrieving revision 1.10 |
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retrieving revision 1.11 |
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diff -u -r1.10 -r1.11 |
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--- ChangeLog 5 Aug 2009 18:45:47 -0000 1.10 |
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+++ ChangeLog 25 Jun 2010 09:40:04 -0000 1.11 |
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@@ -1,6 +1,12 @@ |
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# ChangeLog for sci-biology/trnascan-se |
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-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/ChangeLog,v 1.10 2009/08/05 18:45:47 ssuominen Exp $ |
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+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/ChangeLog,v 1.11 2010/06/25 09:40:04 jlec Exp $ |
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+ |
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+*trnascan-se-1.23-r2 (25 Jun 2010) |
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+ |
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+ 25 Jun 2010; Justin Lecher <jlec@g.o> +trnascan-se-1.23-r2.ebuild, |
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+ +files/trnascan-se-1.23-ldflags.patch: |
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+ Fixed test, #318641; multilib, LDFLAGS, PREFIX awareness |
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|
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05 Aug 2009; Samuli Suominen <ssuominen@g.o> |
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trnascan-se-1.23-r1.ebuild, +files/trnascan-se-1.23-glibc-2.10.patch: |
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|
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|
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|
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1.1 sci-biology/trnascan-se/trnascan-se-1.23-r2.ebuild |
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|
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/trnascan-se/trnascan-se-1.23-r2.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/trnascan-se/trnascan-se-1.23-r2.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: trnascan-se-1.23-r2.ebuild |
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=================================================================== |
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# Copyright 1999-2010 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/trnascan-se-1.23-r2.ebuild,v 1.1 2010/06/25 09:40:04 jlec Exp $ |
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|
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EAPI="3" |
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|
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inherit eutils multilib toolchain-funcs |
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|
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DESCRIPTION="tRNA detection in large-scale genome sequences" |
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HOMEPAGE="http://lowelab.ucsc.edu/tRNAscan-SE/" |
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SRC_URI="mirror://gentoo/${P}.tar.bz2" |
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|
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LICENSE="GPL-2" |
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SLOT="0" |
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KEYWORDS="~amd64 ~x86" |
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IUSE="" |
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|
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RDEPEND="dev-lang/perl" |
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DEPEND="${RDEPEND}" |
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|
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src_prepare() { |
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epatch "${FILESDIR}"/${P}-glibc-2.10.patch |
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epatch "${FILESDIR}"/${P}-ldflags.patch |
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sed -e "s%BINDIR = \$(HOME)/bin%BINDIR = ${EPREFIX}/usr/bin%" \ |
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-e "s%LIBDIR = \$(HOME)/lib/tRNAscan-SE%LIBDIR = ${EPRFIX}/usr/$(get_libdir)/${PN}%" \ |
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-e "s%MANDIR = \$(HOME)/man%MANDIR = ${EPREFIX}/usr/share/man%" \ |
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-e "s%CC = gcc%CC = $(tc-getCC)%" \ |
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-e "s%CFLAGS = -O%CFLAGS = ${CFLAGS}%" \ |
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-i Makefile || die |
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} |
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|
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src_install() { |
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mv tRNAscan-SE.man tRNAscan-SE.man.1 || die |
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dobin covels-SE coves-SE eufindtRNA tRNAscan-SE trnascan-1.4 || die |
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doman tRNAscan-SE.man.1 || die |
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dodoc MANUAL README Release.history || die |
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insinto /usr/$(get_libdir)/${PN}/ |
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doins *.cm gcode.* Dsignal TPCsignal || die |
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insinto /usr/share/doc/${PF} |
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doins Manual.ps || die |
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} |
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|
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src_test() { |
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make PATH="${S}:${PATH}" testrun || die |
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} |
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