Gentoo Archives: gentoo-commits

From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/raxml: raxml-7.2.6.ebuild ChangeLog
Date: Sun, 29 Mar 2015 16:03:53
Message-Id: 20150329160344.AE96414C90@oystercatcher.gentoo.org
1 jlec 15/03/29 16:03:43
2
3 Modified: raxml-7.2.6.ebuild ChangeLog
4 Log:
5 Use REQUIRED_USE to constrain sse3 compatibility
6
7 (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
8
9 Revision Changes Path
10 1.4 sci-biology/raxml/raxml-7.2.6.ebuild
11
12 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild?rev=1.4&view=markup
13 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild?rev=1.4&content-type=text/plain
14 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild?r1=1.3&r2=1.4
15
16 Index: raxml-7.2.6.ebuild
17 ===================================================================
18 RCS file: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild,v
19 retrieving revision 1.3
20 retrieving revision 1.4
21 diff -u -r1.3 -r1.4
22 --- raxml-7.2.6.ebuild 29 Jan 2015 21:23:13 -0000 1.3
23 +++ raxml-7.2.6.ebuild 29 Mar 2015 16:03:43 -0000 1.4
24 @@ -1,12 +1,12 @@
25 # Copyright 1999-2015 Gentoo Foundation
26 # Distributed under the terms of the GNU General Public License v2
27 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild,v 1.3 2015/01/29 21:23:13 mgorny Exp $
28 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild,v 1.4 2015/03/29 16:03:43 jlec Exp $
29
30 -EAPI=4
31 +EAPI=5
32
33 inherit eutils flag-o-matic toolchain-funcs
34
35 -DESCRIPTION="A Program for Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees"
36 +DESCRIPTION="Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees"
37 HOMEPAGE="http://wwwkramer.in.tum.de/exelixis/software.html"
38 SRC_URI="http://wwwkramer.in.tum.de/exelixis/software/RAxML-${PV}.tar.bz2"
39
40 @@ -15,16 +15,14 @@
41 KEYWORDS="~amd64 ~x86"
42 IUSE="cpu_flags_x86_sse3 +threads"
43
44 +REQUIRED_USE="cpu_flags_x86_sse3"
45 +
46 # mpi is not supported in version 7.2.2. mpi is enabled by adding -DPARALLEL to CFLAGS
47 DEPEND="" # mpi? ( virtual/mpi )"
48 RDEPEND="${DEPEND}"
49
50 S="${WORKDIR}/RAxML-${PV}"
51
52 -pkg_pretend() {
53 - use cpu_flags_x86_sse3 || die "This package needs sse3 support in your CPU"
54 -}
55 -
56 src_prepare() {
57 epatch "${FILESDIR}"/${P}-makefile.patch
58
59
60
61
62 1.11 sci-biology/raxml/ChangeLog
63
64 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/ChangeLog?rev=1.11&view=markup
65 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/ChangeLog?rev=1.11&content-type=text/plain
66 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/ChangeLog?r1=1.10&r2=1.11
67
68 Index: ChangeLog
69 ===================================================================
70 RCS file: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v
71 retrieving revision 1.10
72 retrieving revision 1.11
73 diff -u -r1.10 -r1.11
74 --- ChangeLog 29 Jan 2015 21:23:13 -0000 1.10
75 +++ ChangeLog 29 Mar 2015 16:03:43 -0000 1.11
76 @@ -1,6 +1,9 @@
77 # ChangeLog for sci-biology/raxml
78 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
79 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v 1.10 2015/01/29 21:23:13 mgorny Exp $
80 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v 1.11 2015/03/29 16:03:43 jlec Exp $
81 +
82 + 29 Mar 2015; Justin Lecher <jlec@g.o> raxml-7.2.6.ebuild:
83 + Use REQUIRED_USE to constrain sse3 compatibility
84
85 29 Jan 2015; Michał Górny <mgorny@g.o> metadata.xml,
86 raxml-7.2.6.ebuild: