Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/VarScan/
Date: Fri, 14 Apr 2017 17:17:31
Message-Id: 1492190240.2ddeb5981f5bbc80372aec79547a739ef1b1245f.mmokrejs@gentoo
1 commit: 2ddeb5981f5bbc80372aec79547a739ef1b1245f
2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Fri Apr 14 17:17:20 2017 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Fri Apr 14 17:17:20 2017 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=2ddeb598
7
8 sci-biology/VarScan: add RDEPEND on bam-readcount
9
10 Package-Manager: Portage-2.3.5, Repoman-2.3.2
11
12 sci-biology/VarScan/VarScan-2.4.2.ebuild | 5 +++--
13 sci-biology/VarScan/VarScan-2.4.3.ebuild | 3 ++-
14 2 files changed, 5 insertions(+), 3 deletions(-)
15
16 diff --git a/sci-biology/VarScan/VarScan-2.4.2.ebuild b/sci-biology/VarScan/VarScan-2.4.2.ebuild
17 index 36af35941..4add5f679 100644
18 --- a/sci-biology/VarScan/VarScan-2.4.2.ebuild
19 +++ b/sci-biology/VarScan/VarScan-2.4.2.ebuild
20 @@ -1,4 +1,4 @@
21 -# Copyright 1999-2016 Gentoo Foundation
22 +# Copyright 1999-2017 Gentoo Foundation
23 # Distributed under the terms of the GNU General Public License v2
24
25 EAPI=5
26 @@ -21,7 +21,8 @@ IUSE=""
27 DEPEND="
28 >=virtual/jdk-1.5:*
29 !sci-biology/VarScan-bin"
30 -RDEPEND=">=virtual/jre-1.5:*"
31 +RDEPEND=">=virtual/jre-1.5:*
32 + sci-biology/bam-readcount"
33
34 S="${WORKDIR}"/net/sf/varscan
35
36
37 diff --git a/sci-biology/VarScan/VarScan-2.4.3.ebuild b/sci-biology/VarScan/VarScan-2.4.3.ebuild
38 index 8c42848c1..0b3fc2ad5 100644
39 --- a/sci-biology/VarScan/VarScan-2.4.3.ebuild
40 +++ b/sci-biology/VarScan/VarScan-2.4.3.ebuild
41 @@ -20,7 +20,8 @@ IUSE=""
42 DEPEND="
43 >=virtual/jdk-1.5:*
44 !sci-biology/VarScan-bin"
45 -RDEPEND=">=virtual/jre-1.5:*"
46 +RDEPEND=">=virtual/jre-1.5:*
47 + sci-biology/bam-readcount"
48
49 S="${WORKDIR}"/net/sf/varscan