[gentoo-commits] proj/sci:master commit in: sci-biology/scaffold_builder/

[Andrew Ammerlaan]

commit:     d4d0d1524160afa9709b58edeb13c0dd1eff7c9f
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Mon Feb  1 04:51:13 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Mon Feb  1 04:51:13 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=d4d0d152

sci-biology/scaffold_builder: drop pack, py2 only

checked the code, and this is still py2 style

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/scaffold_builder/metadata.xml          | 15 ---------
 .../scaffold_builder/scaffold_builder-2.2.ebuild   | 39 ----------------------
 2 files changed, 54 deletions(-)

diff --git a/sci-biology/scaffold_builder/metadata.xml b/sci-biology/scaffold_builder/metadata.xml
deleted file mode 100644
index 0f267b755..000000000
--- a/sci-biology/scaffold_builder/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@×××××××××××××××.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@g.o</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-	<upstream>
-		<remote-id type="sourceforge">downloads</remote-id>
-	</upstream>
-</pkgmetadata>

diff --git a/sci-biology/scaffold_builder/scaffold_builder-2.2.ebuild b/sci-biology/scaffold_builder/scaffold_builder-2.2.ebuild
deleted file mode 100644
index 9f60e82c6..000000000
--- a/sci-biology/scaffold_builder/scaffold_builder-2.2.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit python-r1
-
-DESCRIPTION="Combine FASTA contigs from a de novo assembly into scaffolds"
-HOMEPAGE="
-	https://sourceforge.net/projects/scaffold-b
-	https://edwards.sdsu.edu/scaffold_builder"
-SRC_URI="
-	https://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v${PV}.zip
-	https://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v2_help.doc
-	https://downloads.sourceforge.net/project/scaffold-b/Manual_v2.1.pdf"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="${PYTHON_DEPS}
-	sci-biology/mummer"
-DEPEND="${RDEPEND}"
-BDEPEND="app-arch/unzip"
-
-S="${WORKDIR}"
-
-src_install(){
-	echo "#! /usr/bin/env python" > scaffold_builder.pyy || die
-	cat scaffold_builder.py >> scaffold_builder.pyy || die
-	mv scaffold_builder.pyy scaffold_builder.py || die
-	python_foreach_impl python_doscript scaffold_builder.py
-	dodoc "${DISTDIR}"/scaffold_builder_v2_help.doc
-	newdoc "${DISTDIR}"/Manual_v2.1.pdf scaffold_builder.pdf
-}