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commit: 932a89023ff2348ea6db521bc3a4faacc38854b2 |
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Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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AuthorDate: Sun Dec 30 20:05:15 2018 +0000 |
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Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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CommitDate: Mon Dec 31 09:44:05 2018 +0000 |
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URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=932a8902 |
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|
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sci-biology/rebase: Version Bump |
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|
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Package-Manager: Portage-2.3.53, Repoman-2.3.12 |
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Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> |
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|
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sci-biology/rebase/Manifest | 1 + |
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sci-biology/rebase/rebase-1901.ebuild | 45 +++++++++++++++++++++++++++++++++++ |
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2 files changed, 46 insertions(+) |
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|
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diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest |
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index 0d935c9e58c..175ef0c271a 100644 |
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--- a/sci-biology/rebase/Manifest |
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+++ b/sci-biology/rebase/Manifest |
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@@ -5,3 +5,4 @@ DIST rebase-1704.tar.xz 124351900 BLAKE2B bdbda714cc07f744b56c83b80a1b0f0a724a99 |
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DIST rebase-1803.tar.xz 152581448 BLAKE2B 7907f0aee9e202f062f5ec4b5e4a112cd0fb3900b3d65dc57ffe4832c5aac088f50c2661f1b9c1bb8b57e7b4f6d453bec2899b460383d06b4e679da13e92aad2 SHA512 ab718e87c33c975bc6a93d3c6be130c9751612b744dc5451bcfde5c10d3d9d68ed4a4d921fff1f48063bfa2e9f3c8a016d4e5e0afa4eb7e4131511767608534b |
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DIST rebase-1806.tar.xz 161844712 BLAKE2B 901167b502b85e88eaa9a8886c5ccac8bf1ec16a7736694b90f896bd4d87ae3792d09f6b154118a6063e30b94a5633b37a7811aefc1d39467d0043d887aeb64a SHA512 9c9c0ef89c8f8e43516c052a06395d61c423b53a79553ceccd992bf72872ece44696091c11c816213b93532aac54a476fe87475f4f67baaa87bc50f64e847d48 |
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DIST rebase-1810.tar.xz 173538148 BLAKE2B 4630d6a2addbb95e70cff73c8f81552545c81be2893dd9f38d19d8bc2fd7ecf4340441498187b654a05012d4dafbd5ad0634e3281f7aed1ee61618308a2325a5 SHA512 641ed61b14970e9804e98abab4e982aeaff378638730964ba162dffacea1c5869e4b1202462f422307d039e1bc6053403c801273f1ca9021c38f29e68a7bfae2 |
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+DIST rebase-1901.tar.xz 182532548 BLAKE2B 5ac8d26ab057bcd21dc9c57abeb226ac70cfabb156b48a51f820789626257be55bb21c9eb2099e6e55b1cfe3691480df0ec9b3f4b18b50ba2712b986c6d057b4 SHA512 1e3553e59c3520190754cb40bb0900e466d9ffd206e6460d3262a7d7d2af8aab0e28f3e60187665362824fa3730211c0e2119016ce5fed49095f9de46c7f25d4 |
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|
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diff --git a/sci-biology/rebase/rebase-1901.ebuild b/sci-biology/rebase/rebase-1901.ebuild |
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new file mode 100644 |
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index 00000000000..f85a4b1698b |
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--- /dev/null |
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+++ b/sci-biology/rebase/rebase-1901.ebuild |
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@@ -0,0 +1,45 @@ |
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+# Copyright 1999-2018 Gentoo Authors |
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+# Distributed under the terms of the GNU General Public License v2 |
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+ |
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+EAPI=6 |
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+ |
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+MY_PV=${PV#1} |
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+ |
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+DESCRIPTION="A restriction enzyme database" |
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+HOMEPAGE="http://rebase.neb.com" |
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+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" |
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+ |
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+SLOT="0" |
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+LICENSE="public-domain" |
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+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" |
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+IUSE="emboss minimal" |
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+ |
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+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" |
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+DEPEND="${RDEPEND}" |
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+ |
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+RESTRICT="binchecks strip" |
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+ |
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+src_compile() { |
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+ if use emboss; then |
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+ echo; einfo "Indexing Rebase for usage with EMBOSS." |
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+ mkdir REBASE || die |
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+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ |
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+ -protofile proto.${MY_PV} -equivalences \ |
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+ || die "Indexing Rebase failed." |
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+ echo |
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+ fi |
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+} |
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+ |
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+src_install() { |
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+ if ! use minimal; then |
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+ insinto /usr/share/${PN} |
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+ doins withrefm.${MY_PV} proto.${MY_PV} |
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+ fi |
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+ newdoc REBASE.DOC README |
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+ if use emboss; then |
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+ insinto /usr/share/EMBOSS/data/REBASE |
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+ doins REBASE/embossre.{enz,ref,sup} |
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+ insinto /usr/share/EMBOSS/data |
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+ doins REBASE/embossre.equ |
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+ fi |
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+} |
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