Gentoo Archives: gentoo-commits

From: "Andreas Hüttel" <dilfridge@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/vaal/files/, sci-biology/vaal/
Date: Sat, 29 Sep 2018 20:34:45
Message-Id: 1538253270.c24d4349f4e48f2a8aeda81be28d40e91d979f40.dilfridge@gentoo
1 commit: c24d4349f4e48f2a8aeda81be28d40e91d979f40
2 Author: Andreas K. Hüttel <dilfridge <AT> gentoo <DOT> org>
3 AuthorDate: Sat Sep 29 20:33:49 2018 +0000
4 Commit: Andreas Hüttel <dilfridge <AT> gentoo <DOT> org>
5 CommitDate: Sat Sep 29 20:34:30 2018 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c24d4349
7
8 sci-biology/vaal: Add build fix for glibc 2.27
9
10 Closes: https://bugs.gentoo.org/647878
11 Signed-off-by: Andreas K. Hüttel <dilfridge <AT> gentoo.org>
12 Package-Manager: Portage-2.3.49, Repoman-2.3.10
13
14 sci-biology/vaal/files/vaal-46233-libieee.patch | 12 ++++++++++++
15 sci-biology/vaal/vaal-46233-r2.ebuild | 3 ++-
16 2 files changed, 14 insertions(+), 1 deletion(-)
17
18 diff --git a/sci-biology/vaal/files/vaal-46233-libieee.patch b/sci-biology/vaal/files/vaal-46233-libieee.patch
19 new file mode 100644
20 index 00000000000..9f5760c0cb1
21 --- /dev/null
22 +++ b/sci-biology/vaal/files/vaal-46233-libieee.patch
23 @@ -0,0 +1,12 @@
24 +diff -ruN vaal-46233.orig/configure.ac vaal-46233/configure.ac
25 +--- vaal-46233.orig/configure.ac 2018-09-29 21:58:06.059065798 +0200
26 ++++ vaal-46233/configure.ac 2018-09-29 22:22:35.947845554 +0200
27 +@@ -12,7 +12,7 @@
28 + AX_PTHREAD
29 + AC_OPENMP
30 +
31 +-CXXFLAGS="$CXXFLAGS -std=c++11 -Wextra -Wall -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-unused -Wno-deprecated -Wno-long-long -Wno-parentheses -fno-nonansi-builtins -mieee-fp -fno-strict-aliasing -iquote . -DNDEBUG"
32 ++CXXFLAGS="$CXXFLAGS -std=c++11 -Wextra -Wall -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-unused -Wno-deprecated -Wno-long-long -Wno-parentheses -fno-nonansi-builtins -fno-strict-aliasing -iquote . -DNDEBUG"
33 +
34 + OS_RELEASE="`uname -r`"
35 + AC_SUBST(CXXFLAGS)
36
37 diff --git a/sci-biology/vaal/vaal-46233-r2.ebuild b/sci-biology/vaal/vaal-46233-r2.ebuild
38 index 85076f33057..0ac15e6ff63 100644
39 --- a/sci-biology/vaal/vaal-46233-r2.ebuild
40 +++ b/sci-biology/vaal/vaal-46233-r2.ebuild
41 @@ -1,4 +1,4 @@
42 -# Copyright 1999-2017 Gentoo Foundation
43 +# Copyright 1999-2018 Gentoo Foundation
44 # Distributed under the terms of the GNU General Public License v2
45
46 EAPI=6
47 @@ -26,6 +26,7 @@ DEPEND="
48
49 DOCS=( "${DISTDIR}/VAAL_manual.doc" )
50 PATCHES=(
51 + "${FILESDIR}/${P}-libieee.patch"
52 "${WORKDIR}/${P}_remove-namespace-std.patch"
53 )