From: | "Markus Dittrich (markusle)" <markusle@g.o> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/vienna-rna: ChangeLog vienna-rna-1.7.0.ebuild |
Date: | Thu, 01 May 2008 13:14:01 |
Message-Id: | E1JrYbm-0001vy-9t@stork.gentoo.org |
1 | markusle 08/05/01 13:13:58 |
2 | |
3 | Modified: ChangeLog |
4 | Added: vienna-rna-1.7.0.ebuild |
5 | Log: |
6 | Version bump. |
7 | (Portage version: 2.1.5_rc6) |
8 | |
9 | Revision Changes Path |
10 | 1.15 sci-biology/vienna-rna/ChangeLog |
11 | |
12 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/vienna-rna/ChangeLog?rev=1.15&view=markup |
13 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/vienna-rna/ChangeLog?rev=1.15&content-type=text/plain |
14 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/vienna-rna/ChangeLog?r1=1.14&r2=1.15 |
15 | |
16 | Index: ChangeLog |
17 | =================================================================== |
18 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v |
19 | retrieving revision 1.14 |
20 | retrieving revision 1.15 |
21 | diff -u -r1.14 -r1.15 |
22 | --- ChangeLog 24 Nov 2007 15:10:04 -0000 1.14 |
23 | +++ ChangeLog 1 May 2008 13:13:57 -0000 1.15 |
24 | @@ -1,6 +1,12 @@ |
25 | # ChangeLog for sci-biology/vienna-rna |
26 | -# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2 |
27 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.14 2007/11/24 15:10:04 markusle Exp $ |
28 | +# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2 |
29 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.15 2008/05/01 13:13:57 markusle Exp $ |
30 | + |
31 | +*vienna-rna-1.7.0 (01 May 2008) |
32 | + |
33 | + 01 May 2008; Markus Dittrich <markusle@g.o> |
34 | + +vienna-rna-1.7.0.ebuild: |
35 | + Version bump. |
36 | |
37 | *vienna-rna-1.6.5 (24 Nov 2007) |
38 | |
39 | |
40 | |
41 | |
42 | 1.1 sci-biology/vienna-rna/vienna-rna-1.7.0.ebuild |
43 | |
44 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.7.0.ebuild?rev=1.1&view=markup |
45 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.7.0.ebuild?rev=1.1&content-type=text/plain |
46 | |
47 | Index: vienna-rna-1.7.0.ebuild |
48 | =================================================================== |
49 | # Copyright 1999-2008 Gentoo Foundation |
50 | # Distributed under the terms of the GNU General Public License v2 |
51 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.7.0.ebuild,v 1.1 2008/05/01 13:13:57 markusle Exp $ |
52 | |
53 | inherit toolchain-funcs multilib eutils versionator |
54 | |
55 | MY_PV=$(get_version_component_range 1-2) |
56 | |
57 | DESCRIPTION="The Vienna RNA Package - RNA secondary structure prediction and comparison" |
58 | LICENSE="vienna-rna" |
59 | HOMEPAGE="http://www.tbi.univie.ac.at/~ivo/RNA" |
60 | SRC_URI="http://www.tbi.univie.ac.at/~ivo/RNA/ViennaRNA-${MY_PV}.tar.gz" |
61 | |
62 | SLOT="0" |
63 | IUSE="" |
64 | KEYWORDS="~amd64 ~x86 ~ppc" |
65 | |
66 | DEPEND="dev-lang/perl |
67 | media-libs/gd" |
68 | |
69 | S="${WORKDIR}/ViennaRNA-${MY_PV}" |
70 | |
71 | src_unpack() { |
72 | unpack ${A} |
73 | cd "${S}" |
74 | epatch "${FILESDIR}"/${PN}-1.6.5-c-fixes.patch |
75 | } |
76 | |
77 | src_compile() { |
78 | econf --with-cluster || die "Configuration failed." |
79 | sed -e "s:LIBDIR = /usr/lib:LIBDIR = ${D}/usr/$(get_libdir):" \ |
80 | -e "s:INCDIR = /usr/include:INCDIR = ${D}/usr/include:" \ |
81 | -i RNAforester/g2-0.70/Makefile \ |
82 | || die "Failed patching RNAForester build system." |
83 | emake || die "Compilation failed." |
84 | |
85 | cd "${S}"/Readseq |
86 | sed -e "s:CC=cc:CC=$(tc-getCC):" -e "s:CFLAGS=:CFLAGS=${CFLAGS}:" \ |
87 | -i Makefile || die "Failed patching readseq Makefile." |
88 | make || die "Failed to compile readseq." |
89 | # TODO: Add (optional?) support for the NCBI toolkit. |
90 | } |
91 | |
92 | src_install() { |
93 | make install DESTDIR="${D}" || die "Installation failed." |
94 | dodoc AUTHORS ChangeLog NEWS README THANKS \ |
95 | || die "Failed to install documentation." |
96 | newbin Readseq/readseq readseq-vienna \ |
97 | || die "Installing readseq failed." |
98 | dodoc Readseq/Readseq.help || die \ |
99 | "Readseq Documentation installation failed." |
100 | newdoc Readseq/Readme README.readseq && \ |
101 | newdoc Readseq/Formats Formats.readseq \ |
102 | || die "Installing readseq Readme failed." |
103 | } |
104 | |
105 | |
106 | |
107 | -- |
108 | gentoo-commits@l.g.o mailing list |