[gentoo-commits] gentoo-x86 commit in sci-biology/bwa: ChangeLog bwa-0.5.0.ebuild

[Andrey Kislyuk (weaver)]

weaver      09/10/29 02:24:56

  Modified:             ChangeLog
  Added:                bwa-0.5.0.ebuild
  Log:
  Version bump
  (Portage version: 2.2_rc30/cvs/Linux x86_64)

Revision  Changes    Path
1.5                  sci-biology/bwa/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/ChangeLog?rev=1.5&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/ChangeLog?rev=1.5&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/ChangeLog?r1=1.4&r2=1.5

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -r1.4 -r1.5
--- ChangeLog	12 Jun 2009 00:52:47 -0000	1.4
+++ ChangeLog	29 Oct 2009 02:24:55 -0000	1.5
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/bwa
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.4 2009/06/12 00:52:47 fauli Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.5 2009/10/29 02:24:55 weaver Exp $
+
+*bwa-0.5.0 (28 Oct 2009)
+
+  28 Oct 2009; Andrey Kislyuk <weaver@g.o> +bwa-0.5.0.ebuild:
+  Version bump
 
   12 Jun 2009; Christian Faulhammer <fauli@g.o> bwa-0.4.6.ebuild:
   respect CFLAGS, thus removing the hard 64bit build and other niceties



1.1                  sci-biology/bwa/bwa-0.5.0.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/bwa-0.5.0.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/bwa-0.5.0.ebuild?rev=1.1&content-type=text/plain

Index: bwa-0.5.0.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.5.0.ebuild,v 1.1 2009/10/29 02:24:55 weaver Exp $

EAPI=2

DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
HOMEPAGE="http://maq.sourceforge.net/"
SRC_URI="mirror://sourceforge/maq/${P}.tar.bz2"

LICENSE="GPL-3"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86"

DEPEND=""
RDEPEND=""

src_prepare() {
	sed -e "/^CFLAGS.*/d" -i "${S}"/Makefile
}

src_install() {
	dobin bwa || die
	doman bwa.1 || die
	exeinto /usr/share/${PN}
	doexe solid2fastq.pl || die
	dodoc ChangeLog NEWS
}