[gentoo-commits] repo/gentoo:master commit in: sci-libs/scipy-python2/

[Pacho Ramos]

commit:     6c0fa2f0110c90577825ff2d7d056e16d9f9bb9c
Author:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Fri May  1 17:15:41 2020 +0000
Commit:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Fri May  1 17:15:51 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6c0fa2f0

sci-libs/scipy-python2: Bump to 1.2.3

Package-Manager: Portage-2.3.96, Repoman-2.3.22
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>

 sci-libs/scipy-python2/Manifest                   |   1 +
 sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild | 129 ++++++++++++++++++++++
 2 files changed, 130 insertions(+)

diff --git a/sci-libs/scipy-python2/Manifest b/sci-libs/scipy-python2/Manifest
index e9452548014..f554d62f88c 100644
--- a/sci-libs/scipy-python2/Manifest
+++ b/sci-libs/scipy-python2/Manifest
@@ -1 +1,2 @@
 DIST scipy-1.1.0.tar.gz 15583560 BLAKE2B 477753e622ee26a3bc8c2cb6829410152df84b29ce17a6d53a66348f5536f7993fedf5d32b782405b54b3af3feabf9bc91c381ed39546076849c2fdb71039404 SHA512 72fe32c6c009613cb78202598e5db14f8e630b3218839cfe18d43d40550d94cc5aa100c6f5d41f40e86ae148e9b6a13431bb91b0f9be44b0569ccd7b725fe973
+DIST scipy-1.2.3.tar.gz 23335997 BLAKE2B 183a0e8266a6fa08ca4fa05511d28f51a5ff9b3e8d00c24a355d2db00327eb973befbefbcf47cb288aafd60718db903ac29f775f519484a7c6d0919693c0a21f SHA512 d7739fa2f25689fc14ddf09477207c990b39b593a85f5c74687df1ffe097f6eee1bb2123aaa286189309f6d3b25cdd7757053d8b1008d1d6b3367a8e3a0a53b1

diff --git a/sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild b/sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild
new file mode 100644
index 00000000000..05b35f960a4
--- /dev/null
+++ b/sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild
@@ -0,0 +1,129 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="threads(+)"
+
+inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs
+
+MY_PN=${PN/-python2}
+MY_P=${MY_PN}-${PV}
+
+DESCRIPTION="Scientific algorithms library for Python (py2 version)"
+HOMEPAGE="https://www.scipy.org/"
+SRC_URI="mirror://pypi/${MY_PN:0:1}/${MY_PN}/${MY_P}.tar.gz"
+S=${WORKDIR}/${MY_P}
+
+LICENSE="BSD LGPL-2"
+SLOT="0"
+IUSE="sparse test"
+RESTRICT="!test? ( test )"
+KEYWORDS="~amd64 ~arm ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos"
+
+CDEPEND="
+	|| (
+		>=dev-python/numpy-python2-1.10[lapack,${PYTHON_USEDEP}]
+		>=dev-python/numpy-1.10[lapack,${PYTHON_USEDEP}]
+	)
+	sci-libs/arpack:0=
+	virtual/cblas
+	virtual/lapack
+	sparse? ( sci-libs/umfpack:0= )"
+DEPEND="${CDEPEND}
+	dev-lang/swig
+	>=dev-python/cython-0.22[${PYTHON_USEDEP}]
+	>=dev-python/setuptools-36[${PYTHON_USEDEP}]
+	virtual/pkgconfig
+	test? (
+		dev-python/nose[${PYTHON_USEDEP}]
+		dev-python/pytest[${PYTHON_USEDEP}]
+	)"
+RDEPEND="${CDEPEND}
+	!<sci-libs/scipy-1.4
+	dev-python/pillow[${PYTHON_USEDEP}]"
+
+DOCS=( HACKING.rst.txt THANKS.txt )
+
+DISTUTILS_IN_SOURCE_BUILD=1
+
+pc_incdir() {
+	$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
+		sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libdir() {
+	$(tc-getPKG_CONFIG) --libs-only-L $@ | \
+		sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libs() {
+	$(tc-getPKG_CONFIG) --libs-only-l $@ | \
+		sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
+		-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
+		| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
+}
+
+python_prepare_all() {
+	# scipy automatically detects libraries by default
+	export {FFTW,FFTW3,UMFPACK}=None
+	use sparse && unset UMFPACK
+	# the missing symbols are in -lpythonX.Y, but since the version can
+	# differ, we just introduce the same scaryness as on Linux/ELF
+	[[ ${CHOST} == *-darwin* ]] \
+		&& append-ldflags -bundle "-undefined dynamic_lookup" \
+		|| append-ldflags -shared
+	[[ -z ${FC}  ]] && export FC="$(tc-getFC)"
+	# hack to force F77 to be FC until bug #278772 is fixed
+	[[ -z ${F77} ]] && export F77="$(tc-getFC)"
+	export F90="${FC}"
+	export SCIPY_FCONFIG="config_fc --noopt --noarch"
+	append-fflags -fPIC
+
+	local libdir="${EPREFIX}"/usr/$(get_libdir)
+	cat >> site.cfg <<-EOF || die
+		[blas]
+		include_dirs = $(pc_incdir cblas)
+		library_dirs = $(pc_libdir cblas blas):${libdir}
+		blas_libs = $(pc_libs cblas blas)
+		[lapack]
+		library_dirs = $(pc_libdir lapack):${libdir}
+		lapack_libs = $(pc_libs lapack)
+	EOF
+
+	# Drop hashes to force rebuild of cython based .c code
+	rm cythonize.dat || die
+
+	distutils-r1_python_prepare_all
+}
+
+python_compile() {
+	# FIXME: parallel python building fails, bug #614464
+	${EPYTHON} tools/cythonize.py || die
+	distutils-r1_python_compile \
+		${SCIPY_FCONFIG}
+}
+
+python_test() {
+	# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
+	distutils_install_for_testing ${SCIPY_FCONFIG}
+	cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+	"${PYTHON}" -c \
+		'import numpy as np; print("relaxed strides checking:", np.ones((10,1),order="C").flags.f_contiguous)' \
+		|| die
+	"${EPYTHON}" -c \
+		"import scipy, sys; r = scipy.test('fast', verbose=2); sys.exit(r)" \
+		|| die "Tests fail with ${EPYTHON}"
+}
+
+python_install() {
+	distutils-r1_python_install ${SCIPY_FCONFIG}
+	python_optimize
+}
+
+pkg_postinst() {
+	elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
+	elog "to your prefered image viewer. Example:"
+	elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
+}