Gentoo Archives: gentoo-commits

From: Andrew Ammerlaan <andrewammerlaan@××××××.net>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/sra_sdk/
Date: Thu, 04 Feb 2021 05:42:57
Message-Id: 1612417370.a9ad84affbf5a38c4e689c715731f16d5bb199f6.andrewammerlaan@gentoo
1 commit: a9ad84affbf5a38c4e689c715731f16d5bb199f6
2 Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
3 AuthorDate: Thu Feb 4 05:42:50 2021 +0000
4 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
5 CommitDate: Thu Feb 4 05:42:50 2021 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a9ad84af
7
8 sci-biology/sra_sdk: call configure correctly for this pack
9
10 Package-Manager: Portage-3.0.14, Repoman-3.0.2
11 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
12
13 sci-biology/sra_sdk/sra_sdk-2.10.9.ebuild | 6 ++++++
14 1 file changed, 6 insertions(+)
15
16 diff --git a/sci-biology/sra_sdk/sra_sdk-2.10.9.ebuild b/sci-biology/sra_sdk/sra_sdk-2.10.9.ebuild
17 index 53e317b5b..ef1c8a5d6 100644
18 --- a/sci-biology/sra_sdk/sra_sdk-2.10.9.ebuild
19 +++ b/sci-biology/sra_sdk/sra_sdk-2.10.9.ebuild
20 @@ -9,6 +9,7 @@ SRC_URI="https://github.com/ncbi/sra-tools/archive/${PV}.tar.gz -> ${P}.tar.gz"
21
22 LICENSE="public-domain"
23 SLOT="0"
24 +# missing dep ngs-sdk
25 KEYWORDS=""
26
27 DEPEND="
28 @@ -20,6 +21,11 @@ RDEPEND="${DEPEND}"
29
30 S="${WORKDIR}/sra-tools-${PV}"
31
32 +src_configure() {
33 + # this is some non-standard configure script
34 + ./configure || die
35 +}
36 +
37 src_compile(){
38 emake OUTDIR="${WORKDIR}"/objdir out
39 emake dynamic