[gentoo-commits] gentoo-x86 commit in sci-biology/bowtie: ChangeLog bowtie-0.9.9.2.ebuild

[Andrey Kislyuk (weaver)]

weaver      09/05/02 23:48:39

  Modified:             ChangeLog
  Added:                bowtie-0.9.9.2.ebuild
  Log:
  Version bump
  (Portage version: 2.2_rc30/cvs/Linux x86_64)

Revision  Changes    Path
1.3                  sci-biology/bowtie/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bowtie/ChangeLog?rev=1.3&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bowtie/ChangeLog?rev=1.3&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bowtie/ChangeLog?r1=1.2&r2=1.3

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/bowtie/ChangeLog,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- ChangeLog	23 Apr 2009 19:15:58 -0000	1.2
+++ ChangeLog	2 May 2009 23:48:39 -0000	1.3
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/bowtie
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/ChangeLog,v 1.2 2009/04/23 19:15:58 maekke Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/ChangeLog,v 1.3 2009/05/02 23:48:39 weaver Exp $
+
+*bowtie-0.9.9.2 (02 May 2009)
+
+  02 May 2009; Andrey Kislyuk <weaver@g.o> +bowtie-0.9.9.2.ebuild:
+  Version bump
 
   23 Apr 2009; Markus Meier <maekke@g.o> bowtie-0.9.9.1:
   amd64/x86 stable, bug #266869



1.1                  sci-biology/bowtie/bowtie-0.9.9.2.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bowtie/bowtie-0.9.9.2.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bowtie/bowtie-0.9.9.2.ebuild?rev=1.1&content-type=text/plain

Index: bowtie-0.9.9.2.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/bowtie-0.9.9.2.ebuild,v 1.1 2009/05/02 23:48:39 weaver Exp $

EAPI="2"

DESCRIPTION="An ultrafast memory-efficient short read aligner"
HOMEPAGE="http://bowtie-bio.sourceforge.net/"
SRC_URI="mirror://sourceforge/bowtie-bio/${P}-src.zip"

LICENSE="Artistic"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86"

DEPEND="app-arch/unzip"
RDEPEND=""

# NB: Bundles code from Maq (http://maq.sf.net) and the SeqAn library (http://www.seqan.de)

src_prepare() {
	sed -i 's/$(CXX) $(RELEASE_FLAGS)/$(CXX) $(CXXFLAGS) $(RELEASE_FLAGS)/' "${S}/Makefile" || die
}

src_install() {
	dobin bowtie bowtie-* || die
	newman MANUAL bowtie.1
	dodoc AUTHORS NEWS TUTORIAL
}