Gentoo Archives: gentoo-commits

From: Justin Lecher <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/artemis/
Date: Sun, 29 Jan 2017 14:21:01
Message-Id: 1485698206.94f515f53613ad903865e2c78f394cac5e9dc65a.jlec@gentoo
1 commit: 94f515f53613ad903865e2c78f394cac5e9dc65a
2 Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
3 AuthorDate: Sun Jan 29 13:56:46 2017 +0000
4 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
5 CommitDate: Sun Jan 29 13:56:46 2017 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=94f515f5
7
8 sci-biology/artemis: Add missing slot operator
9
10 Package-Manager: Portage-2.3.3, Repoman-2.3.1
11 Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
12
13 sci-biology/artemis/artemis-9999.ebuild | 7 ++++---
14 sci-biology/artemis/metadata.xml | 2 +-
15 2 files changed, 5 insertions(+), 4 deletions(-)
16
17 diff --git a/sci-biology/artemis/artemis-9999.ebuild b/sci-biology/artemis/artemis-9999.ebuild
18 index d9e915d..5d71760 100644
19 --- a/sci-biology/artemis/artemis-9999.ebuild
20 +++ b/sci-biology/artemis/artemis-9999.ebuild
21 @@ -1,4 +1,4 @@
22 -# Copyright 1999-2016 Gentoo Foundation
23 +# Copyright 1999-2017 Gentoo Foundation
24 # Distributed under the terms of the GNU General Public License v2
25 # $Id$
26
27 @@ -8,7 +8,8 @@ inherit java-pkg-2 java-ant-2 git-r3
28
29 DESCRIPTION="DNA sequence viewer/annotation (Artemis) and comparison (ACT) tool"
30 HOMEPAGE="http://www.sanger.ac.uk/resources/software/artemis"
31 -SRC_URI="ftp://ftp.sanger.ac.uk/pub/resources/software/artemis/artemis.pdf -> ${P}.manual.pdf
32 +SRC_URI="
33 + ftp://ftp.sanger.ac.uk/pub/resources/software/artemis/artemis.pdf -> ${P}.manual.pdf
34 ftp://ftp.sanger.ac.uk/pub/resources/software/artemis/v16/art_html_build.zip -> ${P}.html_build.zip"
35 EGIT_REPO_URI="https://github.com/sanger-pathogens/Artemis"
36
37 @@ -19,7 +20,7 @@ IUSE=""
38
39 # uses its own BamView
40 RDEPEND="
41 - sci-biology/samtools
42 + sci-biology/samtools:0
43 >=virtual/jre-1.6:*"
44 DEPEND="${RDEPEND}
45 !sci-biology/artemis-bin
46
47 diff --git a/sci-biology/artemis/metadata.xml b/sci-biology/artemis/metadata.xml
48 index 1699e58..f68a1b6 100644
49 --- a/sci-biology/artemis/metadata.xml
50 +++ b/sci-biology/artemis/metadata.xml
51 @@ -5,7 +5,7 @@
52 <email>mmokrejs@×××××××××××××××.cz</email>
53 <name>Martin Mokrejs</name>
54 </maintainer>
55 -<maintainer type="project">
56 + <maintainer type="project">
57 <email>sci-biology@g.o</email>
58 <name>Gentoo Biology Project</name>
59 </maintainer>