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commit: 1f20252245bf55c15c8664783024d06c1eaf6c6a |
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Author: David Seifert <soap <AT> gentoo <DOT> org> |
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AuthorDate: Sat May 7 13:13:13 2022 +0000 |
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Commit: David Seifert <soap <AT> gentoo <DOT> org> |
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CommitDate: Sat May 7 13:13:13 2022 +0000 |
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URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1f202522 |
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|
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sci-biology/STAR: fix GCC 12 build |
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|
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Closes: https://bugs.gentoo.org/840586 |
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Signed-off-by: David Seifert <soap <AT> gentoo.org> |
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|
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sci-biology/STAR/STAR-2.7.10a.ebuild | 5 ++++- |
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.../STAR/files/STAR-2.7.10a-missing-include.patch | 22 ++++++++++++++++++++++ |
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2 files changed, 26 insertions(+), 1 deletion(-) |
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|
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diff --git a/sci-biology/STAR/STAR-2.7.10a.ebuild b/sci-biology/STAR/STAR-2.7.10a.ebuild |
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index 7239efcfe45c..c3deb5a94b0a 100644 |
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--- a/sci-biology/STAR/STAR-2.7.10a.ebuild |
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+++ b/sci-biology/STAR/STAR-2.7.10a.ebuild |
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@@ -17,7 +17,10 @@ RDEPEND="sci-libs/htslib:=" |
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DEPEND="${RDEPEND}" |
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BDEPEND="virtual/pkgconfig" |
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|
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-PATCHES=( "${FILESDIR}"/${PN}-2.7.10a-fix-build-system.patch ) |
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+PATCHES=( |
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+ "${FILESDIR}"/${PN}-2.7.10a-fix-build-system.patch |
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+ "${FILESDIR}"/${PN}-2.7.10a-missing-include.patch |
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+) |
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DOCS=( README.md CHANGES.md RELEASEnotes.md doc/STARmanual.pdf ) |
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|
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pkg_pretend() { |
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|
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diff --git a/sci-biology/STAR/files/STAR-2.7.10a-missing-include.patch b/sci-biology/STAR/files/STAR-2.7.10a-missing-include.patch |
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new file mode 100644 |
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index 000000000000..c056a8aad887 |
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--- /dev/null |
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+++ b/sci-biology/STAR/files/STAR-2.7.10a-missing-include.patch |
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@@ -0,0 +1,22 @@ |
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+From f5ad94329db4fd81fc6ae30684c298772002e30b Mon Sep 17 00:00:00 2001 |
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+From: David Seifert <soap@g.o> |
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+Date: Sat, 7 May 2022 15:06:11 +0200 |
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+Subject: [PATCH] Add missing `#include <array>` (GCC 12) |
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+ |
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+Bug: https://bugs.gentoo.org/840586 |
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+--- |
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+ source/SoloCommon.h | 1 + |
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+ 1 file changed, 1 insertion(+) |
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+ |
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+diff --git a/source/SoloCommon.h b/source/SoloCommon.h |
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+index 2a1d5fcf..5adc5040 100644 |
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+--- a/source/SoloCommon.h |
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++++ b/source/SoloCommon.h |
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+@@ -1,6 +1,7 @@ |
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+ #ifndef H_SoloCommon |
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+ #define H_SoloCommon |
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+ |
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++#include <array> |
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+ #include <unordered_map> |
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+ |
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+ typedef struct{ |
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