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commit: 918d50a836b2cd7639dfaea61628b94c87a5c186 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Mon Jul 11 09:10:57 2016 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Mon Jul 11 09:10:57 2016 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=918d50a8 |
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|
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sci-biology/TransDecoder: respect EPREFIX, add missing die |
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|
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Package-Manager: portage-2.2.28 |
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|
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sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild | 2 +- |
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sci-biology/TransDecoder/TransDecoder-2.1.0.ebuild | 6 +++++- |
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2 files changed, 6 insertions(+), 2 deletions(-) |
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|
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diff --git a/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild b/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild |
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index dfe3fbb..9ca6b2b 100644 |
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--- a/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild |
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+++ b/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild |
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@@ -53,7 +53,7 @@ src_install(){ |
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dobin TransDecoder.Predict TransDecoder.LongOrfs |
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insinto /usr/share/${PN}/util |
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doins util/*.pl |
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- chmod -R a+rx "${D}"/usr/share/${PN}/util |
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+ chmod -R a+rx "${D}"/"${EPREFIX}"/usr/share/${PN}/util || die |
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# zap the bundled cdhit binaries copied from transdecoder_plugins/cdhit/ to util/bin |
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rm -rf util/bin |
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# |
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|
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diff --git a/sci-biology/TransDecoder/TransDecoder-2.1.0.ebuild b/sci-biology/TransDecoder/TransDecoder-2.1.0.ebuild |
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index 9fbcea5..2a65c0c 100644 |
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--- a/sci-biology/TransDecoder/TransDecoder-2.1.0.ebuild |
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+++ b/sci-biology/TransDecoder/TransDecoder-2.1.0.ebuild |
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@@ -53,7 +53,7 @@ src_install(){ |
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dobin TransDecoder.Predict TransDecoder.LongOrfs |
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insinto /usr/share/${PN}/util |
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doins util/*.pl |
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- chmod -R a+rx "${D}"/usr/share/${PN}/util |
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+ chmod -R a+rx "${D}"/"${EPREFIX}"/usr/share/${PN}/util || die |
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# zap the bundled cdhit binaries copied from transdecoder_plugins/cdhit/ to util/bin |
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rm -rf util/bin |
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# |
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@@ -67,6 +67,10 @@ src_install(){ |
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# * /usr/bin/TiedHash.pm |
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# |
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perl_set_version |
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+ # this is broken and installs into |
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+ # /scratch/mmokrejs/gentoo/var/tmp/portage/sci-biology/TransDecoder-2.1.0/image/scratch/mmokrejs/gentoo/scratch/mmokrejs/gentoo/usr/lib/perl5/vendor_perl/ |
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+ # instead of |
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+ # /scratch/mmokrejs/gentoo/var/tmp/portage/sci-biology/TransDecoder-2.1.0/image/scratch/mmokrejs/gentoo/usr/lib/perl5/vendor_perl/ |
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insinto ${VENDOR_LIB}/${PN} |
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doins PerlLib/*.pm |
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# dodoc Release.Notes |
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