[gentoo-commits] gentoo-x86 commit in sci-biology/biopython: ChangeLog biopython-1.51.ebuild

[Andrey Kislyuk (weaver)]

weaver      09/09/09 21:45:48

  Modified:             ChangeLog
  Added:                biopython-1.51.ebuild
  Log:
  Version bump
  (Portage version: 2.2_rc30/cvs/Linux x86_64)

Revision  Changes    Path
1.36                 sci-biology/biopython/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/biopython/ChangeLog?rev=1.36&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/biopython/ChangeLog?rev=1.36&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/biopython/ChangeLog?r1=1.35&r2=1.36

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v
retrieving revision 1.35
retrieving revision 1.36
diff -u -r1.35 -r1.36
--- ChangeLog	26 Aug 2009 14:45:14 -0000	1.35
+++ ChangeLog	9 Sep 2009 21:45:48 -0000	1.36
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/biopython
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.35 2009/08/26 14:45:14 fauli Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.36 2009/09/09 21:45:48 weaver Exp $
+
+*biopython-1.51 (09 Sep 2009)
+
+  09 Sep 2009; Andrey Kislyuk <weaver@g.o>
+  +files/biopython-1.51-flex.patch, +biopython-1.51.ebuild:
+  Version bump
 
   26 Aug 2009; Christian Faulhammer <fauli@g.o> metadata.xml:
   remove now unused flag description



1.1                  sci-biology/biopython/biopython-1.51.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/biopython/biopython-1.51.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/biopython/biopython-1.51.ebuild?rev=1.1&content-type=text/plain

Index: biopython-1.51.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.51.ebuild,v 1.1 2009/09/09 21:45:48 weaver Exp $

EAPI="2"

NEED_PYTHON=2.4
inherit distutils eutils base

DESCRIPTION="Biopython - Python modules for computational molecular biology"
LICENSE="as-is"
HOMEPAGE="http://www.biopython.org"
SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz"

SLOT="0"
IUSE="mysql postgres"
KEYWORDS="~alpha ~amd64 ~ppc ~sparc ~x86"

DEPEND="dev-python/numpy
	>=dev-python/reportlab-2.0
	sys-devel/flex"

RDEPEND="${DEPEND}
	mysql? ( dev-python/mysql-python )
	postgres? ( dev-python/psycopg )"

PATCHES=(
	"${FILESDIR}"/${P}-flex.patch
)

src_compile() {
	distutils_src_compile
}

src_install() {
	DOCS="CONTRIB DEPRECATED NEWS README"
	distutils_src_install

	dodir "/usr/share/doc/${PF}"
	cp -r Doc/* "${D}/usr/share/doc/${PF}/" || \
			die "Failed to install documentation."
	dodir "/usr/share/${PN}"
	rm -f Tests/*.pyc || \
			die "Failed to remove precompiled test files."
	cp -r --preserve=mode Scripts Tests "${D}/usr/share/${PN}/" || \
			die "Failed to install shared files."
}

src_test() {
	cd "${S}/Tests"
	PYTHONPATH="${PYTHONPATH}:${S}" \
			python run_tests.py --no-gui || die "Tests failed."
}