Get Gentoo!
gentoo.org sites
gentoo.org Wiki Bugs Forums Packages
Planet Archives Sources
Infra Status

Gentoo Archives: gentoo-commits

From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/mira: ChangeLog mira-3.0.3.ebuild mira-3.0.0.ebuild mira-3.0.5.ebuild
Date: Mon, 28 Jun 2010 21:32:26
Message-Id: 20100628213220.D85032C621@corvid.gentoo.org
1 jlec 10/06/28 21:32:20
2
3 Modified: ChangeLog mira-3.0.3.ebuild mira-3.0.0.ebuild
4 mira-3.0.5.ebuild
5 Log:
6 Prepared for prefix, #325929
7 (Portage version: 2.2_rc67/cvs/Linux x86_64)
8
9 Revision Changes Path
10 1.9 sci-biology/mira/ChangeLog
11
12 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/ChangeLog?rev=1.9&view=markup
13 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/ChangeLog?rev=1.9&content-type=text/plain
14 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/ChangeLog?r1=1.8&r2=1.9
15
16 Index: ChangeLog
17 ===================================================================
18 RCS file: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v
19 retrieving revision 1.8
20 retrieving revision 1.9
21 diff -u -r1.8 -r1.9
22 --- ChangeLog 5 May 2010 08:00:05 -0000 1.8
23 +++ ChangeLog 28 Jun 2010 21:32:20 -0000 1.9
24 @@ -1,6 +1,10 @@
25 # ChangeLog for sci-biology/mira
26 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
27 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v 1.8 2010/05/05 08:00:05 weaver Exp $
28 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/ChangeLog,v 1.9 2010/06/28 21:32:20 jlec Exp $
29 +
30 + 28 Jun 2010; Justin Lecher <jlec@g.o> mira-3.0.0.ebuild,
31 + mira-3.0.3.ebuild, mira-3.0.5.ebuild:
32 + Prepared for prefix, #325929
33
34 *mira-3.0.5 (05 May 2010)
35
36
37
38
39 1.2 sci-biology/mira/mira-3.0.3.ebuild
40
41 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.3.ebuild?rev=1.2&view=markup
42 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.3.ebuild?rev=1.2&content-type=text/plain
43 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.3.ebuild?r1=1.1&r2=1.2
44
45 Index: mira-3.0.3.ebuild
46 ===================================================================
47 RCS file: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.3.ebuild,v
48 retrieving revision 1.1
49 retrieving revision 1.2
50 diff -u -r1.1 -r1.2
51 --- mira-3.0.3.ebuild 18 Mar 2010 15:32:24 -0000 1.1
52 +++ mira-3.0.3.ebuild 28 Jun 2010 21:32:20 -0000 1.2
53 @@ -1,12 +1,12 @@
54 # Copyright 1999-2010 Gentoo Foundation
55 # Distributed under the terms of the GNU General Public License v2
56 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.3.ebuild,v 1.1 2010/03/18 15:32:24 weaver Exp $
57 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.3.ebuild,v 1.2 2010/06/28 21:32:20 jlec Exp $
58
59 -EAPI="2"
60 +EAPI="3"
61
62 MIRA_3RDPARTY_PV="06-03-2010"
63
64 -inherit base autotools
65 +inherit autotools base multilib
66
67 DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina"
68 HOMEPAGE="http://www.chevreux.org/projects_mira.html"
69 @@ -16,7 +16,7 @@
70 LICENSE="GPL-2"
71 SLOT="0"
72 IUSE="doc"
73 -KEYWORDS="~amd64 ~x86"
74 +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos"
75
76 CDEPEND=">=dev-libs/boost-1.35.0"
77 DEPEND="${CDEPEND}
78 @@ -30,6 +30,13 @@
79 AT_M4DIR="config/m4" eautoreconf
80 }
81
82 +src_configure() {
83 + econf \
84 + --with-boost="${EPREFIX}"/usr/$(get_libdir) \
85 + --with-boost-libdir="${EPREFIX}"/usr/$(get_libdir) \
86 + --with-boost-thread=boost_thread-mt
87 +}
88 +
89 src_compile() {
90 base_src_compile
91 if use doc; then emake -C doc clean docs || die; fi
92
93
94
95 1.5 sci-biology/mira/mira-3.0.0.ebuild
96
97 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild?rev=1.5&view=markup
98 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild?rev=1.5&content-type=text/plain
99 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild?r1=1.4&r2=1.5
100
101 Index: mira-3.0.0.ebuild
102 ===================================================================
103 RCS file: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v
104 retrieving revision 1.4
105 retrieving revision 1.5
106 diff -u -r1.4 -r1.5
107 --- mira-3.0.0.ebuild 25 Feb 2010 19:00:05 -0000 1.4
108 +++ mira-3.0.0.ebuild 28 Jun 2010 21:32:20 -0000 1.5
109 @@ -1,12 +1,12 @@
110 # Copyright 1999-2010 Gentoo Foundation
111 # Distributed under the terms of the GNU General Public License v2
112 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v 1.4 2010/02/25 19:00:05 ssuominen Exp $
113 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v 1.5 2010/06/28 21:32:20 jlec Exp $
114
115 -EAPI="2"
116 +EAPI="3"
117
118 MIRA_3RDPARTY_PV="31-01-2010"
119
120 -inherit base autotools
121 +inherit autotools base multilib
122
123 DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina"
124 HOMEPAGE="http://www.chevreux.org/projects_mira.html"
125 @@ -16,7 +16,7 @@
126 LICENSE="GPL-2"
127 SLOT="0"
128 IUSE="doc"
129 -KEYWORDS="~amd64 ~x86"
130 +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos"
131
132 CDEPEND=">=dev-libs/boost-1.35.0"
133 DEPEND="${CDEPEND}
134 @@ -30,6 +30,13 @@
135 AT_M4DIR="config/m4" eautoreconf
136 }
137
138 +src_configure() {
139 + econf \
140 + --with-boost="${EPREFIX}"/usr/$(get_libdir) \
141 + --with-boost-libdir="${EPREFIX}"/usr/$(get_libdir) \
142 + --with-boost-thread=boost_thread-mt
143 +}
144 +
145 src_compile() {
146 base_src_compile
147 if use doc; then emake -C doc clean docs || die; fi
148
149
150
151 1.2 sci-biology/mira/mira-3.0.5.ebuild
152
153 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.5.ebuild?rev=1.2&view=markup
154 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.5.ebuild?rev=1.2&content-type=text/plain
155 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mira/mira-3.0.5.ebuild?r1=1.1&r2=1.2
156
157 Index: mira-3.0.5.ebuild
158 ===================================================================
159 RCS file: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.5.ebuild,v
160 retrieving revision 1.1
161 retrieving revision 1.2
162 diff -u -r1.1 -r1.2
163 --- mira-3.0.5.ebuild 5 May 2010 08:00:05 -0000 1.1
164 +++ mira-3.0.5.ebuild 28 Jun 2010 21:32:20 -0000 1.2
165 @@ -1,12 +1,12 @@
166 # Copyright 1999-2010 Gentoo Foundation
167 # Distributed under the terms of the GNU General Public License v2
168 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.5.ebuild,v 1.1 2010/05/05 08:00:05 weaver Exp $
169 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.5.ebuild,v 1.2 2010/06/28 21:32:20 jlec Exp $
170
171 -EAPI="2"
172 +EAPI="3"
173
174 MIRA_3RDPARTY_PV="17-04-2010"
175
176 -inherit base autotools
177 +inherit autotools base multilib
178
179 DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina"
180 HOMEPAGE="http://www.chevreux.org/projects_mira.html"
181 @@ -16,7 +16,7 @@
182 LICENSE="GPL-2"
183 SLOT="0"
184 IUSE="doc"
185 -KEYWORDS="~amd64 ~x86"
186 +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos"
187
188 CDEPEND=">=dev-libs/boost-1.35.0"
189 DEPEND="${CDEPEND}
190 @@ -30,6 +30,13 @@
191 AT_M4DIR="config/m4" eautoreconf
192 }
193
194 +src_configure() {
195 + econf \
196 + --with-boost="${EPREFIX}"/usr/$(get_libdir) \
197 + --with-boost-libdir="${EPREFIX}"/usr/$(get_libdir) \
198 + --with-boost-thread=boost_thread-mt
199 +}
200 +
201 src_compile() {
202 base_src_compile
203 if use doc; then emake -C doc clean docs || die; fi
Report Message
Find on MARC Find on Google Groups