Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/kat/
Date: Wed, 30 Nov 2016 22:34:04
Message-Id: 1480545220.1d87d213225badbbf304e163a61815219052cca4.mmokrejs@gentoo
1 commit: 1d87d213225badbbf304e163a61815219052cca4
2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Wed Nov 30 22:33:40 2016 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Wed Nov 30 22:33:40 2016 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=1d87d213
7
8 sci-biology/kat: version bump, blocked by upstream issue #61
9
10 Package-Manager: portage-2.3.2
11
12 sci-biology/kat/{kat-2.1.1.ebuild => kat-2.2.0.ebuild} | 10 ++++++++--
13 1 file changed, 8 insertions(+), 2 deletions(-)
14
15 diff --git a/sci-biology/kat/kat-2.1.1.ebuild b/sci-biology/kat/kat-2.2.0.ebuild
16 similarity index 62%
17 rename from sci-biology/kat/kat-2.1.1.ebuild
18 rename to sci-biology/kat/kat-2.2.0.ebuild
19 index 8133fdb..38ddae2 100644
20 --- a/sci-biology/kat/kat-2.1.1.ebuild
21 +++ b/sci-biology/kat/kat-2.2.0.ebuild
22 @@ -4,7 +4,9 @@
23
24 EAPI=6
25
26 -PYTHON_COMPAT=( python{3_4,3_5} ) # requires python >= 3.1
27 +PYTHON_COMPAT=( python{2_7,3_4,3_5} ) # https://github.com/Ensembl/Bio-DB-HTS/issues/30
28 +
29 +inherit python-r1
30
31 DESCRIPTION="K-mer Analysis Toolkit (histogram, filter, compare sets, plot)"
32 HOMEPAGE="https://github.com/TGAC/KAT"
33 @@ -19,4 +21,8 @@ DEPEND="dev-libs/boost:0
34 dev-python/matplotlib
35 sci-visualization/gnuplot"
36 RDEPEND="${DEPEND}"
37 -# contains bundled modified version of jellyfish-2.2.
38 +# contains bundled modified version of jellyfish-2.2 which should install under different filenames
39 +
40 +src_configure(){
41 + econf PYTHON_VERSION="${PYTHON_SINGLE_TARGET}"
42 +}