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commit: f4a311c42b306a1a49fa91c28203f388d324d326 |
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Author: Martin Mokrejs <mmokrejs <AT> gmail <DOT> com> |
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AuthorDate: Sun Oct 17 15:42:43 2021 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Sun Oct 17 15:42:43 2021 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f4a311c4 |
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|
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sci-biology/LINKS: new package |
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|
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The LINKS perl script probably needs some sed hackery to eventually |
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start using system-wide btl_bloomfilter file BloomFilter.i and also |
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perl's CORE/EXTERN.h. |
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|
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Package-Manager: Portage-3.0.28, Repoman-3.0.3 |
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Signed-off-by: Martin Mokrejs <mmokrejs <AT> gmail.com> |
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|
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sci-biology/LINKS/LINKS-1.8.7.ebuild | 25 +++++++++++++++++++++++++ |
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sci-biology/LINKS/metadata.xml | 12 ++++++++++++ |
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2 files changed, 37 insertions(+) |
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|
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diff --git a/sci-biology/LINKS/LINKS-1.8.7.ebuild b/sci-biology/LINKS/LINKS-1.8.7.ebuild |
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new file mode 100644 |
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index 000000000..e9cf2fbd8 |
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--- /dev/null |
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+++ b/sci-biology/LINKS/LINKS-1.8.7.ebuild |
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@@ -0,0 +1,25 @@ |
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+# Copyright 1999-2021 Gentoo Authors |
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+# Distributed under the terms of the GNU General Public License v2 |
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+ |
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+EAPI=7 |
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+ |
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+DESCRIPTION="Scaffold genome assemblies by Chromium/PacBio/Nanopore reads" |
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+HOMEPAGE="https://github.com/bcgsc/LINKS" |
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+SRC_URI="https://github.com/bcgsc/LINKS/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" |
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+ |
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+LICENSE="GPL-3" |
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+SLOT="0" |
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+KEYWORDS="~amd64 ~x86" |
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+ |
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+RESTRICT="test" |
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+ |
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+RDEPEND=" |
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+ >=dev-lang/perl-1.6 |
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+ dev-lang/swig |
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+ sci-biology/btl_bloomfilter |
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+" |
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+ |
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+src_install(){ |
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+ dobin bin/LINKS *.pl tools/*.pl |
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+ dodoc README.md |
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+} |
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|
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diff --git a/sci-biology/LINKS/metadata.xml b/sci-biology/LINKS/metadata.xml |
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new file mode 100644 |
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index 000000000..138cb7705 |
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--- /dev/null |
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+++ b/sci-biology/LINKS/metadata.xml |
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@@ -0,0 +1,12 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer type="person"> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+ <maintainer type="project"> |
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+ <email>sci-biology@g.o</email> |
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+ <name>Gentoo Biology Project</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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