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jlec 15/03/03 15:17:10 |
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|
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Modified: ChangeLog |
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Added: bwa-0.7.12.ebuild |
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Log: |
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Version BUmp; thanks Ted Tanberry |
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(Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!) |
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Revision Changes Path |
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1.14 sci-biology/bwa/ChangeLog |
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|
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bwa/ChangeLog?rev=1.14&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bwa/ChangeLog?rev=1.14&content-type=text/plain |
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diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bwa/ChangeLog?r1=1.13&r2=1.14 |
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v |
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retrieving revision 1.13 |
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retrieving revision 1.14 |
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diff -u -r1.13 -r1.14 |
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--- ChangeLog 11 Mar 2013 14:54:24 -0000 1.13 |
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+++ ChangeLog 3 Mar 2015 15:17:10 -0000 1.14 |
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@@ -1,6 +1,12 @@ |
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# ChangeLog for sci-biology/bwa |
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-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.13 2013/03/11 14:54:24 jlec Exp $ |
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+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.14 2015/03/03 15:17:10 jlec Exp $ |
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+ |
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+*bwa-0.7.12 (03 Mar 2015) |
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+ |
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+ 03 Mar 2015; Justin Lecher <jlec@g.o> +bwa-0.7.12.ebuild, |
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+ +files/bwa-0.7.12-Makefile.patch: |
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+ Version BUmp; thanks Ted Tanberry |
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|
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11 Mar 2013; Justin Lecher <jlec@g.o> metadata.xml: |
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Drop Andrey as maintainer so that bugs get assigned to sci-biology directly |
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@@ -63,4 +69,3 @@ |
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26 Feb 2009; Andrey Kislyuk <weaver@g.o> +metadata.xml, |
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+bwa-0.4.5.ebuild: |
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New package, ebuild written by me. |
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- |
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1.1 sci-biology/bwa/bwa-0.7.12.ebuild |
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bwa/bwa-0.7.12.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bwa/bwa-0.7.12.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: bwa-0.7.12.ebuild |
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=================================================================== |
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# Copyright 1999-2015 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.7.12.ebuild,v 1.1 2015/03/03 15:17:10 jlec Exp $ |
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EAPI=5 |
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inherit eutils toolchain-funcs |
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DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" |
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HOMEPAGE="http://bio-bwa.sourceforge.net/" |
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SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2" |
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|
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LICENSE="GPL-3" |
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SLOT="0" |
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IUSE="" |
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KEYWORDS="~amd64 ~x86 ~x64-macos" |
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PATCHES=( "${FILESDIR}"/${P}-Makefile.patch ) |
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src_prepare() { |
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epatch ${PATCHES[@]} |
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tc-export CC AR |
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} |
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|
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src_install() { |
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dobin bwa |
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doman bwa.1 |
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|
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exeinto /usr/libexec/${PN} |
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doexe qualfa2fq.pl xa2multi.pl |
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|
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dodoc NEWS.md README-alt.md README.md |
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} |
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