1 |
commit: 7528fce17b53eae7fadb405a538dae7d86e0c51d |
2 |
Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
3 |
AuthorDate: Mon Feb 27 20:56:47 2017 +0000 |
4 |
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
5 |
CommitDate: Mon Feb 27 20:56:47 2017 +0000 |
6 |
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7528fce1 |
7 |
|
8 |
sci-biology/rebase: Version Bump |
9 |
|
10 |
Package-Manager: Portage-2.3.3, Repoman-2.3.1 |
11 |
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> |
12 |
|
13 |
sci-biology/rebase/Manifest | 1 + |
14 |
sci-biology/rebase/rebase-1703.ebuild | 46 +++++++++++++++++++++++++++++++++++ |
15 |
2 files changed, 47 insertions(+) |
16 |
|
17 |
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest |
18 |
index 78e5ed5667..25a0097b75 100644 |
19 |
--- a/sci-biology/rebase/Manifest |
20 |
+++ b/sci-biology/rebase/Manifest |
21 |
@@ -1,2 +1,3 @@ |
22 |
DIST rebase-1701.tar.xz 120604368 SHA256 cc8cf90f874dcb179b9f7654780ff783066fa6a67fffb90d6ac08d2917fa671b SHA512 1833db9d78508bbd5317f9b42b0e8129096f1695d5a14d5e2b6043bc94091a76ac404c576ad622be4e32c46aff7975a7ec3e36c3da71ce3ce1665868ee0d77cb WHIRLPOOL 641b755b92e8aa9ca2d9a69760d0414a95f38512fa235a9856a953398d5ab0c853bb4743f6790aada1d90f968bfaa76c0651aadea842fff9700941c506a29ecd |
23 |
DIST rebase-1702.tar.xz 117583312 SHA256 f010388af45a58c9f40270240c65fd5a82a1fce27b1f1eb0d1fbe4b3ffd20966 SHA512 3bba0738840b966a0a58123f265de1951428c599f3af9c581e1becec17ba3a93233a231de0673dbb2dc0bb82d54096e0eed43846967bf232f412bb785ce3b23f WHIRLPOOL 70aeede45b1795fc8cc634675381d4458b32445016139d17ac5b9951cf2ff54bbc0fa50d91bf49bbed19d250553275e3c1b15cf0de5149e36d3e1567c74031ec |
24 |
+DIST rebase-1703.tar.xz 122252304 SHA256 dbd5fa2751b693b1babcef9c69a6f7a9e539550aeea712c569dcc0f9a93998e3 SHA512 838bf5e09073ff8520403d955a8195298def1d792d1fd3044e7c8896c6202a0340c1e96dbe80e85c5801cd3be3ed63f19488101cca02d46cdf5f1d0521ede796 WHIRLPOOL b42693781f5faa8a2dbd15204d8f1fc2dc08fb233fa536bd3c0405799059b830c8be214d34f54e2645c8c20e7bd1359882167d175a5026a8acbea29b4f00208c |
25 |
|
26 |
diff --git a/sci-biology/rebase/rebase-1703.ebuild b/sci-biology/rebase/rebase-1703.ebuild |
27 |
new file mode 100644 |
28 |
index 0000000000..f241beaf07 |
29 |
--- /dev/null |
30 |
+++ b/sci-biology/rebase/rebase-1703.ebuild |
31 |
@@ -0,0 +1,46 @@ |
32 |
+# Copyright 1999-2017 Gentoo Foundation |
33 |
+# Distributed under the terms of the GNU General Public License v2 |
34 |
+# $Id$ |
35 |
+ |
36 |
+EAPI=6 |
37 |
+ |
38 |
+MY_PV=${PV#1} |
39 |
+ |
40 |
+DESCRIPTION="A restriction enzyme database" |
41 |
+HOMEPAGE="http://rebase.neb.com" |
42 |
+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" |
43 |
+ |
44 |
+SLOT="0" |
45 |
+LICENSE="public-domain" |
46 |
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" |
47 |
+IUSE="emboss minimal" |
48 |
+ |
49 |
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" |
50 |
+DEPEND="${RDEPEND}" |
51 |
+ |
52 |
+RESTRICT="binchecks strip" |
53 |
+ |
54 |
+src_compile() { |
55 |
+ if use emboss; then |
56 |
+ echo; einfo "Indexing Rebase for usage with EMBOSS." |
57 |
+ mkdir REBASE || die |
58 |
+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ |
59 |
+ -protofile proto.${MY_PV} -equivalences \ |
60 |
+ || die "Indexing Rebase failed." |
61 |
+ echo |
62 |
+ fi |
63 |
+} |
64 |
+ |
65 |
+src_install() { |
66 |
+ if ! use minimal; then |
67 |
+ insinto /usr/share/${PN} |
68 |
+ doins withrefm.${MY_PV} proto.${MY_PV} |
69 |
+ fi |
70 |
+ newdoc REBASE.DOC README |
71 |
+ if use emboss; then |
72 |
+ insinto /usr/share/EMBOSS/data/REBASE |
73 |
+ doins REBASE/embossre.{enz,ref,sup} |
74 |
+ insinto /usr/share/EMBOSS/data |
75 |
+ doins REBASE/embossre.equ |
76 |
+ fi |
77 |
+} |