From: | "Andrey Kislyuk (weaver)" <weaver@g.o> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/abyss: ChangeLog abyss-1.1.0.ebuild abyss-1.0.16.ebuild |
Date: | Mon, 04 Jan 2010 17:55:03 |
Message-Id: | E1NRr8t-0000NN-5a@stork.gentoo.org |
1 | weaver 10/01/04 17:54:59 |
2 | |
3 | Modified: ChangeLog |
4 | Added: abyss-1.1.0.ebuild |
5 | Removed: abyss-1.0.16.ebuild |
6 | Log: |
7 | Version bump |
8 | (Portage version: 2.2_rc30/cvs/Linux x86_64) |
9 | |
10 | Revision Changes Path |
11 | 1.2 sci-biology/abyss/ChangeLog |
12 | |
13 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/ChangeLog?rev=1.2&view=markup |
14 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/ChangeLog?rev=1.2&content-type=text/plain |
15 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/ChangeLog?r1=1.1&r2=1.2 |
16 | |
17 | Index: ChangeLog |
18 | =================================================================== |
19 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v |
20 | retrieving revision 1.1 |
21 | retrieving revision 1.2 |
22 | diff -u -r1.1 -r1.2 |
23 | --- ChangeLog 25 Nov 2009 03:39:14 -0000 1.1 |
24 | +++ ChangeLog 4 Jan 2010 17:54:58 -0000 1.2 |
25 | @@ -1,6 +1,12 @@ |
26 | # ChangeLog for sci-biology/abyss |
27 | -# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 |
28 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.1 2009/11/25 03:39:14 weaver Exp $ |
29 | +# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 |
30 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.2 2010/01/04 17:54:58 weaver Exp $ |
31 | + |
32 | +*abyss-1.1.0 (04 Jan 2010) |
33 | + |
34 | + 04 Jan 2010; Andrey Kislyuk <weaver@g.o> -abyss-1.0.16.ebuild, |
35 | + +abyss-1.1.0.ebuild: |
36 | + Version bump |
37 | |
38 | *abyss-1.0.16 (24 Nov 2009) |
39 | |
40 | |
41 | |
42 | |
43 | 1.1 sci-biology/abyss/abyss-1.1.0.ebuild |
44 | |
45 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/abyss-1.1.0.ebuild?rev=1.1&view=markup |
46 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/abyss-1.1.0.ebuild?rev=1.1&content-type=text/plain |
47 | |
48 | Index: abyss-1.1.0.ebuild |
49 | =================================================================== |
50 | # Copyright 1999-2010 Gentoo Foundation |
51 | # Distributed under the terms of the GNU General Public License v2 |
52 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/abyss-1.1.0.ebuild,v 1.1 2010/01/04 17:54:58 weaver Exp $ |
53 | |
54 | EAPI="2" |
55 | |
56 | DESCRIPTION="Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler" |
57 | HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/abyss" |
58 | SRC_URI="http://www.bcgsc.ca/downloads/abyss/${P}.tar.gz" |
59 | |
60 | LICENSE="abyss" |
61 | SLOT="0" |
62 | IUSE="+mpi" |
63 | KEYWORDS="~amd64 ~x86" |
64 | |
65 | DEPEND="dev-cpp/sparsehash |
66 | mpi? ( virtual/mpi )" |
67 | RDEPEND="${DEPEND}" |
68 | |
69 | # todo: --enable-maxk=N configure option |
70 | # todo: fix automagic mpi toggling |
71 | |
72 | src_install() { |
73 | einstall || die |
74 | } |