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commit: d7d5b682db50724172e027e581d6525b0e549324 |
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Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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AuthorDate: Tue Dec 3 14:52:25 2013 +0000 |
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Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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CommitDate: Tue Dec 3 14:52:25 2013 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d7d5b682 |
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|
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sci-misc/elmer-fem: Bump EAPI; fix DESCRIPTION; drop keywords from live ebuild; fix whitespacing |
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|
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Package-Manager: portage-2.2.7 |
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RepoMan-Options: --force |
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|
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--- |
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sci-misc/elmer-fem/ChangeLog | 12 ++++ |
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sci-misc/elmer-fem/elmer-fem-5.4.1-r1.ebuild | 65 ------------------- |
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sci-misc/elmer-fem/elmer-fem-6.0_p4651.ebuild | 54 ++++++++++++++++ |
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sci-misc/elmer-fem/elmer-fem-9999.ebuild | 65 ++++++++----------- |
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.../elmer-fem/files/elmer-fem-6.0_p4651-oos.patch | 75 ++++++++++++++++++++++ |
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.../files/elmer-fem-6.0_p4651-underlinking.patch | 23 +++++++ |
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sci-misc/elmer-fem/metadata.xml | 5 ++ |
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7 files changed, 197 insertions(+), 102 deletions(-) |
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|
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diff --git a/sci-misc/elmer-fem/ChangeLog b/sci-misc/elmer-fem/ChangeLog |
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new file mode 100644 |
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index 0000000..de1bf37 |
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--- /dev/null |
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+++ b/sci-misc/elmer-fem/ChangeLog |
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@@ -0,0 +1,12 @@ |
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+# ChangeLog for sci-misc/elmer-fem |
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+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: $ |
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+ |
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+*elmer-fem-6.0_p4651 (03 Dec 2013) |
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+ |
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+ 03 Dec 2013; Justin Lecher <jlec@g.o> -elmer-fem-5.4.1-r1.ebuild, |
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+ +elmer-fem-6.0_p4651.ebuild, elmer-fem-9999.ebuild, |
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+ +files/elmer-fem-6.0_p4651-oos.patch, |
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+ +files/elmer-fem-6.0_p4651-underlinking.patch, +metadata.xml: |
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+ Bump EAPI; fix DESCRIPTION; drop keywords from live ebuild; fix whitespacing |
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+ |
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|
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diff --git a/sci-misc/elmer-fem/elmer-fem-5.4.1-r1.ebuild b/sci-misc/elmer-fem/elmer-fem-5.4.1-r1.ebuild |
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deleted file mode 100644 |
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index ce60dcc..0000000 |
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--- a/sci-misc/elmer-fem/elmer-fem-5.4.1-r1.ebuild |
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+++ /dev/null |
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@@ -1,65 +0,0 @@ |
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-# Copyright 1999-2007 Gentoo Foundation |
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-# Distributed under the terms of the GNU General Public License v2 |
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-# $Header: $ |
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- |
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-EAPI="4" |
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- |
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-inherit autotools eutils |
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- |
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-ELMER_ROOT="elmerfem" |
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-MY_PN=${PN/elmer-/} |
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- |
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-DESCRIPTION="Elmer is a collection of finite element programs, libraries, and visualization tools, main fem" |
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-HOMEPAGE="http://www.csc.fi/english/pages/elmer" |
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-SRC_URI="http://elmerfem.svn.sourceforge.net/viewvc/${ELMER_ROOT}/release/${PV}/${MY_PN}/?view=tar -> ${P}.tar.gz" |
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-RESTRICT="mirror" |
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- |
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-LICENSE="GPL-2" |
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-SLOT="0" |
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-KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86" |
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-IUSE="mpi debug" |
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-DEPEND="sys-libs/glibc |
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- virtual/blas |
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- virtual/lapack |
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- sci-libs/arpack |
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- sci-libs/matc |
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- sci-libs/elmer-hutiter |
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- sci-libs/elmer-eio |
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- mpi? ( sys-cluster/mpich2 )" |
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-RDEPEND="${DEPEND}" |
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-# Note this seems to only configure correctly with the elmer version of umfpack |
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-# But this doesn't stop it from compiling / working without it |
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- |
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-S="${WORKDIR}/${PV}/fem" |
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- |
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-src_unpack() { |
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- unpack ${A} |
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- cd "${S}" |
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- # configure must be executable |
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- chmod +x configure |
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- epatch ${FILESDIR}/elmer-fem-Makefile-install.patch |
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- eautoreconf |
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-} |
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- |
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-src_compile() { |
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- cd "${S}" |
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- local myconf |
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- export FC="gfortran" |
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- export F77="gfortran" |
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- myconf="$myconf --with-blas --with-lapack --with-arpack --with-huti" |
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- myconf="$myconf --with-eiof --with-matc" |
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- #TODO parpack support is not picked up from the arpack package |
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- #TODO --with-hypre --with-umfpack |
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- |
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- use mpi && myconf="$myconf --with-mpi --with-mpi-dir=/usr" |
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- use debug && |
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- myconf="${myconf} --with-debug" || |
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- myconf="${myconf} --without-debug" |
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- econf $myconf || die "econf failed" |
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- emake || die "emake failed" |
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-} |
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- |
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- |
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-src_install() { |
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- emake ELMER_SOLVER_DATADIR="${D}/usr/share/elmersolver" DESTDIR="${D}" install || die "emake install failed" |
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-} |
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|
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diff --git a/sci-misc/elmer-fem/elmer-fem-6.0_p4651.ebuild b/sci-misc/elmer-fem/elmer-fem-6.0_p4651.ebuild |
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new file mode 100644 |
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index 0000000..d8289c2 |
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--- /dev/null |
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+++ b/sci-misc/elmer-fem/elmer-fem-6.0_p4651.ebuild |
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@@ -0,0 +1,54 @@ |
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+# Copyright 1999-2013 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=5 |
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+ |
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+AUTOTOOLS_AUTORECONF=true |
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+FORTRAN_STANDARD=90 |
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+ |
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+inherit autotools-utils fortran-2 multilib |
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+ |
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+ELMER_ROOT="elmerfem" |
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+MY_PN=${PN/elmer-/} |
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+ |
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+DESCRIPTION="Finite element programs, libraries, and visualization tools - main fem" |
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+HOMEPAGE="http://www.csc.fi/english/pages/elmer" |
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+SRC_URI="http://elmerfem.svn.sourceforge.net/viewvc/${ELMER_ROOT}/release/${PV%_p*}/${MY_PN}/?view=tar&pathrev=4651 -> ${P}.tar.gz" |
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+ |
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+LICENSE="GPL-2" |
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+SLOT="0" |
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+KEYWORDS="~amd64 ~x86" |
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+IUSE="mpi debug" |
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+ |
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+RDEPEND=" |
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+ virtual/blas |
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+ virtual/lapack |
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+ sci-libs/arpack |
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+ sci-libs/matc |
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+ sci-libs/elmer-hutiter |
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+ sci-libs/elmer-eio |
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+ mpi? ( sys-cluster/mpich2 )" |
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+DEPEND="${RDEPEND}" |
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+# Note this seems to only configure correctly with the elmer version of umfpack |
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+# But this doesn't stop it from compiling / working without it |
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+ |
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+S="${WORKDIR}/fem" |
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+ |
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+PATCHES=( |
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+ "${FILESDIR}"/${P}-oos.patch |
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+ "${FILESDIR}"/${P}-underlinking.patch |
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+) |
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+ |
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+src_configure() { |
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+ local myeconfargs=( |
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+ $(use_with debug) |
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+ $(usex mpi --with-mpi "") |
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+ $(usex mpi --with-mpi-dir="${EPREFIX}"/usr "") |
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+ --with-arpack="$($(tc-getPKG_CONFIG) --libs arpack)" |
168 |
+ --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" |
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+ --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" |
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+ --with-huti --with-eiof --with-matc |
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+ ) |
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+ autotools-utils_src_configure |
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+} |
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|
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diff --git a/sci-misc/elmer-fem/elmer-fem-9999.ebuild b/sci-misc/elmer-fem/elmer-fem-9999.ebuild |
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index 9d97083..0c1260d 100644 |
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--- a/sci-misc/elmer-fem/elmer-fem-9999.ebuild |
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+++ b/sci-misc/elmer-fem/elmer-fem-9999.ebuild |
179 |
@@ -1,27 +1,29 @@ |
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-# Copyright 1999-2007 Gentoo Foundation |
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+# Copyright 1999-2013 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: $ |
184 |
|
185 |
-EAPI="4" |
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+EAPI=5 |
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|
188 |
-inherit autotools eutils subversion |
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+AUTOTOOLS_AUTORECONF=true |
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+FORTRAN_STANDARD=90 |
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+ |
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+inherit autotools-utils fortran-2 multilib subversion |
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|
194 |
ELMER_ROOT="elmerfem" |
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MY_PN=${PN/elmer-/} |
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|
197 |
-DESCRIPTION="Elmer is a collection of finite element programs, libraries, and visualization tools, main fem" |
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+DESCRIPTION="Finite element programs, libraries, and visualization tools - main fem" |
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HOMEPAGE="http://www.csc.fi/english/pages/elmer" |
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-#SRC_URI="http://elmerfem.svn.sourceforge.net/viewvc/${ELMER_ROOT}/release/${PV}/${MY_PN}/?view=tar -> ${P}.tar.gz" |
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SRC_URI="" |
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-RESTRICT="mirror" |
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ESVN_REPO_URI="https://elmerfem.svn.sourceforge.net/svnroot/elmerfem/trunk/${MY_PN}" |
204 |
ESVN_PROJECT="${MY_PN}" |
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|
206 |
LICENSE="GPL-2" |
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SLOT="0" |
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-KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86" |
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+KEYWORDS="" |
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IUSE="mpi debug" |
211 |
-DEPEND="sys-libs/glibc |
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+ |
213 |
+RDEPEND=" |
214 |
virtual/blas |
215 |
virtual/lapack |
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sci-libs/arpack |
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@@ -29,37 +31,26 @@ DEPEND="sys-libs/glibc |
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sci-libs/elmer-hutiter |
219 |
sci-libs/elmer-eio |
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mpi? ( sys-cluster/mpich2 )" |
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-RDEPEND="${DEPEND}" |
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+DEPEND="${RDEPEND}" |
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+# Note this seems to only configure correctly with the elmer version of umfpack |
224 |
+# But this doesn't stop it from compiling / working without it |
225 |
|
226 |
-S="${WORKDIR}/${PV}/fem" |
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+S="${WORKDIR}/fem" |
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|
229 |
-src_prepare() { |
230 |
- #unpack ${A} |
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- cd "${S}" |
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- # configure must be executable |
233 |
- #chmod +x configure |
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- epatch ${FILESDIR}/elmer-fem-Makefile-install.patch |
235 |
- eautoreconf |
236 |
-} |
237 |
+PATCHES=( |
238 |
+ "${FILESDIR}"/${PN}-6.0_p4651-oos.patch |
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+ "${FILESDIR}"/${PN}-6.0_p4651-underlinking.patch |
240 |
+) |
241 |
|
242 |
src_configure() { |
243 |
- cd "${S}" |
244 |
- local myconf |
245 |
- export FC="gfortran" |
246 |
- export F77="gfortran" |
247 |
- myconf="$myconf --with-blas --with-lapack --with-arpack --with-huti" |
248 |
- myconf="$myconf --with-eiof --with-matc" |
249 |
- #TODO parpack support is not picked up from the arpack package |
250 |
- #TODO --with-hypre --with-umfpack |
251 |
- |
252 |
- use mpi && myconf="$myconf --with-mpi --with-mpi-dir=/usr" |
253 |
- use debug && |
254 |
- myconf="${myconf} --with-debug" || |
255 |
- myconf="${myconf} --without-debug" |
256 |
- econf $myconf || die "econf failed" |
257 |
-} |
258 |
- |
259 |
- |
260 |
-src_install() { |
261 |
- emake ELMER_SOLVER_DATADIR="/usr/share/elmersolver" DESTDIR=${D} install || die "emake install failed" |
262 |
+ local myeconfargs=( |
263 |
+ $(use_with debug) |
264 |
+ $(usex mpi --with-mpi "") |
265 |
+ $(usex mpi --with-mpi-dir="${EPREFIX}"/usr "") |
266 |
+ --with-arpack="$($(tc-getPKG_CONFIG) --libs arpack)" |
267 |
+ --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" |
268 |
+ --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" |
269 |
+ --with-huti --with-eiof --with-matc |
270 |
+ ) |
271 |
+ autotools-utils_src_configure |
272 |
} |
273 |
|
274 |
diff --git a/sci-misc/elmer-fem/files/elmer-fem-6.0_p4651-oos.patch b/sci-misc/elmer-fem/files/elmer-fem-6.0_p4651-oos.patch |
275 |
new file mode 100644 |
276 |
index 0000000..00291bc |
277 |
--- /dev/null |
278 |
+++ b/sci-misc/elmer-fem/files/elmer-fem-6.0_p4651-oos.patch |
279 |
@@ -0,0 +1,75 @@ |
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+ src/Makefile.am | 6 +++--- |
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+ 1 file changed, 3 insertions(+), 3 deletions(-) |
282 |
+ |
283 |
+diff --git a/src/Makefile.am b/src/Makefile.am |
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+index 9e48c31..b94705c 100644 |
285 |
+--- a/src/Makefile.am |
286 |
++++ b/src/Makefile.am |
287 |
+@@ -182,11 +182,11 @@ SC2Elmer_SOURCES = SC2Elmer.c |
288 |
+ |
289 |
+ if USE_LOCAL_MPIF_H |
290 |
+ mpif: mpif_stub.h |
291 |
+- $(CP) mpif_stub.h mpif.h |
292 |
+- $(CP) mpif_stub.h mpif |
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++ $(CP) $(srcdir)/mpif_stub.h mpif.h |
294 |
++ $(CP) $(srcdir)/mpif_stub.h mpif |
295 |
+ else |
296 |
+ mpif: mpif_stub.h |
297 |
+- $(CP) mpif_stub.h mpif |
298 |
++ $(CP) $(srcdir)/mpif_stub.h mpif |
299 |
+ endif |
300 |
+ |
301 |
+ EXTRA_DIST = \ |
302 |
+ src/Makefile.am | 25 +++++++++++++------------ |
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+ 1 file changed, 13 insertions(+), 12 deletions(-) |
304 |
+ |
305 |
+diff --git a/src/Makefile.am b/src/Makefile.am |
306 |
+index 92de7a4..89a2236 100644 |
307 |
+--- a/src/Makefile.am |
308 |
++++ b/src/Makefile.am |
309 |
+@@ -144,32 +144,33 @@ ELMER_SOLVER_DATADIR=$(prefix)/share/elmersolver |
310 |
+ install-data-local: |
311 |
+ @echo "Installing solvers to ${ELMER_SOLVER_DATADIR}/lib" |
312 |
+ |
313 |
+- mkdir -p $(DESTDIR)$(ELMER_SOLVER_DATADIR)/lib |
314 |
+- $(CP) `ls -f *$(SHL_EXT) | grep -v libelmersolver` $(DESTDIR)$(ELMER_SOLVER_DATADIR)/lib |
315 |
+- $(CP) elements.def $(DESTDIR)$(ELMER_SOLVER_DATADIR)/lib |
316 |
+- $(CP) SOLVER.KEYWORDS $(DESTDIR)$(ELMER_SOLVER_DATADIR)/lib |
317 |
++ mkdir -p $(DESTDIR)$(ELMER_SOLVER_DATADIR)/$(libdir) |
318 |
++ $(CP) `ls -f $(builddir)/*$(SHL_EXT) | grep -v libelmersolver` $(DESTDIR)$(ELMER_SOLVER_DATADIR)/$(libdir) |
319 |
++ $(CP) $(srcdir)/elements.def $(DESTDIR)$(ELMER_SOLVER_DATADIR)/$(libdir) |
320 |
++ $(CP) $(srcdir)/SOLVER.KEYWORDS $(DESTDIR)$(ELMER_SOLVER_DATADIR)/$(libdir) |
321 |
+ |
322 |
+ @echo "Installing *.mod to ${ELMER_SOLVER_DATADIR}/include" |
323 |
+ mkdir -p $(DESTDIR)$(ELMER_SOLVER_DATADIR)/include |
324 |
+- $(CP) *.mod $(DESTDIR)$(ELMER_SOLVER_DATADIR)/include |
325 |
++ $(CP) $(builddir)/*.mod $(DESTDIR)$(ELMER_SOLVER_DATADIR)/include |
326 |
+ |
327 |
+ |
328 |
+ install-exec-local: |
329 |
+ @echo "Installing stuff to ${prefix}/bin" |
330 |
+ $(MKDIR) $(DESTDIR)$(prefix)/bin |
331 |
+- $(CP) ElmerSolver$(EXEEXT) $(DESTDIR)$(prefix)/bin |
332 |
+- $(CP) ViewFactors$(EXEEXT) $(DESTDIR)$(prefix)/bin |
333 |
+- $(CP) GebhardtFactors$(EXEEXT) $(DESTDIR)$(prefix)/bin |
334 |
++ $(CP) $(builddir)/ElmerSolver$(EXEEXT) $(DESTDIR)$(prefix)/bin |
335 |
++ $(CP) $(builddir)/ViewFactors$(EXEEXT) $(DESTDIR)$(prefix)/bin |
336 |
++ $(CP) $(builddir)/GebhardtFactors$(EXEEXT) $(DESTDIR)$(prefix)/bin |
337 |
+ if USE_WINDOWS_COMPILER |
338 |
+ $(CP) libelmersolver*$(SHL_EXT) $(DESTDIR)$(prefix)/lib |
339 |
+ else |
340 |
+- $(CP) libelmersolver-$(VERSION)$(SHL_EXT) $(DESTDIR)$(prefix)/lib |
341 |
++ mkdir -p $(DESTDIR)$(prefix)/$(libdir) |
342 |
++ $(CP) $(builddir)/libelmersolver-$(VERSION)$(SHL_EXT) $(DESTDIR)$(prefix)/$(libdir) |
343 |
+ $(LN) -sf libelmersolver-$(VERSION)$(SHL_EXT)\ |
344 |
+- $(DESTDIR)$(prefix)/lib/libelmersolver$(SHL_EXT) |
345 |
++ $(DESTDIR)$(prefix)/$(libdir)/libelmersolver$(SHL_EXT) |
346 |
+ endif |
347 |
+- $(CP) elmerf90 elmerf90-nosh elmerld $(DESTDIR)$(prefix)/bin |
348 |
++ $(CP) $(builddir)/elmerf90 $(builddir)/elmerf90-nosh elmerld $(DESTDIR)$(prefix)/bin |
349 |
+ if USE_MPI |
350 |
+- $(CP) ElmerSolver_mpi$(EXEEXT) $(DESTDIR)$(prefix)/bin |
351 |
++ $(CP) $(builddir)/ElmerSolver_mpi$(EXEEXT) $(DESTDIR)$(prefix)/bin |
352 |
+ endif |
353 |
+ |
354 |
+ clean-local: |
355 |
|
356 |
diff --git a/sci-misc/elmer-fem/files/elmer-fem-6.0_p4651-underlinking.patch b/sci-misc/elmer-fem/files/elmer-fem-6.0_p4651-underlinking.patch |
357 |
new file mode 100644 |
358 |
index 0000000..7c6be1d |
359 |
--- /dev/null |
360 |
+++ b/sci-misc/elmer-fem/files/elmer-fem-6.0_p4651-underlinking.patch |
361 |
@@ -0,0 +1,23 @@ |
362 |
+ src/Makefile.am | 4 ++-- |
363 |
+ 1 file changed, 2 insertions(+), 2 deletions(-) |
364 |
+ |
365 |
+diff --git a/src/Makefile.am b/src/Makefile.am |
366 |
+index b94705c..92de7a4 100644 |
367 |
+--- a/src/Makefile.am |
368 |
++++ b/src/Makefile.am |
369 |
+@@ -122,13 +122,13 @@ if USE_WINDOWS_COMPILER |
370 |
+ else |
371 |
+ $(FC) $(SH_LINKING_TO_FLAGS) $(RPATH_ELMER) $(B64FLAGS) $(LDFLAGS) \ |
372 |
+ -o ViewFactors$(EXE_EXT) ViewFactors$(OBJ_EXT) mpi_stubs$(OBJ_EXT) \ |
373 |
+- -L. -lelmersolver viewaxis/libviewaxis.a view3d/libview3d.a $(EXTRA_LIBS) $(BLAS_LIBS) $(STDCXX_LIBS) |
374 |
++ -L. -lelmersolver viewaxis/libviewaxis.a view3d/libview3d.a $(EXTRA_LIBS) $(BLAS_LIBS) $(STDCXX_LIBS) -lhuti |
375 |
+ endif |
376 |
+ |
377 |
+ GebhardtFactors$(EXE_EXT): libelmersolver$(SHL_EXT) GebhardtFactors$(OBJ_EXT) mpi_stubs$(OBJ_EXT) |
378 |
+ $(FC) $(SH_LINKING_TO_FLAGS) $(RPATH_ELMER) $(B64FLAGS) $(LDFLAGS) \ |
379 |
+ -o GebhardtFactors$(EXE_EXT) GebhardtFactors$(OBJ_EXT) mpi_stubs$(OBJ_EXT) \ |
380 |
+- -L. -lelmersolver viewaxis/libviewaxis.a view3d/libview3d.a $(EXTRA_LIBS) |
381 |
++ -L. -lelmersolver viewaxis/libviewaxis.a view3d/libview3d.a $(EXTRA_LIBS) -lhuti |
382 |
+ |
383 |
+ |
384 |
+ |
385 |
|
386 |
diff --git a/sci-misc/elmer-fem/metadata.xml b/sci-misc/elmer-fem/metadata.xml |
387 |
new file mode 100644 |
388 |
index 0000000..897aa2e |
389 |
--- /dev/null |
390 |
+++ b/sci-misc/elmer-fem/metadata.xml |
391 |
@@ -0,0 +1,5 @@ |
392 |
+<?xml version="1.0" encoding="UTF-8"?> |
393 |
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
394 |
+<pkgmetadata> |
395 |
+ <herd>sci</herd> |
396 |
+</pkgmetadata> |