[gentoo-commits] gentoo-x86 commit in sci-biology/psipred/files: 3.0-path.patch

[Justin Lecher (jlec)]

jlec        10/05/06 18:27:49

  Added:                3.0-path.patch
  Log:
  Version Bump, #317977; fixed installation of shipped bins
  (Portage version: 2.2_rc67/cvs/Linux x86_64)

Revision  Changes    Path
1.1                  sci-biology/psipred/files/3.0-path.patch

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/files/3.0-path.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/files/3.0-path.patch?rev=1.1&content-type=text/plain

Index: 3.0-path.patch
===================================================================
diff --git a/runpsipred b/runpsipred
index e133686..6ad57cc 100755
--- a/runpsipred
+++ b/runpsipred
@@ -14,13 +14,13 @@
 set dbname = uniref90
 
 # Where the NCBI programs have been installed
-set ncbidir = /usr/local/bin
+set ncbidir = @GENTOO_PORTAGE_EPREFIX@/usr/bin
 
 # Where the PSIPRED V3 programs have been installed
-set execdir = ./bin
+set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin
 
 # Where the PSIPRED V3 data files have been installed
-set datadir = ./data
+set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data
 
 set basename = $1:r
 set rootname = $basename:t
diff --git a/runpsipred_single b/runpsipred_single
index 1f7680b..7bd5bc3 100755
--- a/runpsipred_single
+++ b/runpsipred_single
@@ -10,10 +10,10 @@
 # NOTE: Script modified to be more cluster friendly (DTJ April 2008)
 
 # Where the PSIPRED V3 programs have been installed
-set execdir = ./bin
+set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin
 
 # Where the PSIPRED V3 data files have been installed
-set datadir = ./data
+set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data
 
 set basename = $1:r
 set rootname = $basename:t