| 1 |
commit: ee8afc8624d23ec0bd41a5b63ca03ab40973af00 |
| 2 |
Author: David Seifert <soap <AT> gentoo <DOT> org> |
| 3 |
AuthorDate: Sat Feb 25 15:16:26 2017 +0000 |
| 4 |
Commit: David Seifert <soap <AT> gentoo <DOT> org> |
| 5 |
CommitDate: Sat Feb 25 15:23:58 2017 +0000 |
| 6 |
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ee8afc86 |
| 7 |
|
| 8 |
sci-biology/clustalw: Modernise to EAPI 6 |
| 9 |
|
| 10 |
Package-Manager: Portage-2.3.3, Repoman-2.3.1 |
| 11 |
|
| 12 |
.../{clustalw-1.83-r3.ebuild => clustalw-1.83-r4.ebuild} | 14 +++++++------- |
| 13 |
sci-biology/clustalw/files/1.83-as-needed.patch | 4 ++-- |
| 14 |
2 files changed, 9 insertions(+), 9 deletions(-) |
| 15 |
|
| 16 |
diff --git a/sci-biology/clustalw/clustalw-1.83-r3.ebuild b/sci-biology/clustalw/clustalw-1.83-r4.ebuild |
| 17 |
similarity index 74% |
| 18 |
rename from sci-biology/clustalw/clustalw-1.83-r3.ebuild |
| 19 |
rename to sci-biology/clustalw/clustalw-1.83-r4.ebuild |
| 20 |
index 6047a08ed4..bf6e6a9c28 100644 |
| 21 |
--- a/sci-biology/clustalw/clustalw-1.83-r3.ebuild |
| 22 |
+++ b/sci-biology/clustalw/clustalw-1.83-r4.ebuild |
| 23 |
@@ -1,10 +1,10 @@ |
| 24 |
-# Copyright 1999-2014 Gentoo Foundation |
| 25 |
+# Copyright 1999-2017 Gentoo Foundation |
| 26 |
# Distributed under the terms of the GNU General Public License v2 |
| 27 |
# $Id$ |
| 28 |
|
| 29 |
-EAPI=5 |
| 30 |
+EAPI=6 |
| 31 |
|
| 32 |
-inherit eutils toolchain-funcs |
| 33 |
+inherit toolchain-funcs |
| 34 |
|
| 35 |
DESCRIPTION="General purpose multiple alignment program for DNA and proteins" |
| 36 |
HOMEPAGE="http://www.embl-heidelberg.de/~seqanal/" |
| 37 |
@@ -17,8 +17,10 @@ IUSE="" |
| 38 |
|
| 39 |
S="${WORKDIR}"/${PN}${PV} |
| 40 |
|
| 41 |
+PATCHES=( "${FILESDIR}"/${PV}-as-needed.patch ) |
| 42 |
+ |
| 43 |
src_prepare() { |
| 44 |
- epatch "${FILESDIR}"/${PV}-as-needed.patch |
| 45 |
+ default |
| 46 |
|
| 47 |
sed \ |
| 48 |
-e "/^CC/s:cc:$(tc-getCC):g" \ |
| 49 |
@@ -30,7 +32,5 @@ src_prepare() { |
| 50 |
|
| 51 |
src_install() { |
| 52 |
dobin clustalw |
| 53 |
- dodoc README clustalv.doc clustalw.doc clustalw.ms |
| 54 |
- insinto /usr/share/doc/${PF} |
| 55 |
- doins clustalw_help |
| 56 |
+ dodoc README clustalv.doc clustalw{.doc,.ms,_help} |
| 57 |
} |
| 58 |
|
| 59 |
diff --git a/sci-biology/clustalw/files/1.83-as-needed.patch b/sci-biology/clustalw/files/1.83-as-needed.patch |
| 60 |
index 62b4654cdd..9bb35b43f2 100644 |
| 61 |
--- a/sci-biology/clustalw/files/1.83-as-needed.patch |
| 62 |
+++ b/sci-biology/clustalw/files/1.83-as-needed.patch |
| 63 |
@@ -1,5 +1,5 @@ |
| 64 |
---- makefile 2003-01-29 09:53:45.000000000 +0100 |
| 65 |
-+++ makefile.new 2009-08-17 08:33:16.000000000 +0200 |
| 66 |
+--- a/makefile |
| 67 |
++++ b/makefile |
| 68 |
@@ -11,11 +11,11 @@ |
| 69 |
HEADERS = general.h clustalw.h |
Archives