Gentoo Archives: gentoo-commits

From: Alexey Shvetsov <alexxy@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/gromacs/
Date: Tue, 01 Mar 2011 15:31:27
Message-Id: 14c06611ed982ae4aaf87b11edc18af2b1171c20.alexxy@gentoo
1 commit: 14c06611ed982ae4aaf87b11edc18af2b1171c20
2 Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
3 AuthorDate: Tue Mar 1 15:31:39 2011 +0000
4 Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
5 CommitDate: Tue Mar 1 15:31:39 2011 +0000
6 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=14c06611
7
8 Add epatch_user back for gromacs live ebuilds
9
10 (Portage version: 2.2.0_alpha25/git/Linux x86_64, signed Manifest commit with key F82F92E6)
11
12 ---
13 sci-chemistry/gromacs/gromacs-4.5.9999.ebuild | 5 ++++-
14 sci-chemistry/gromacs/gromacs-9999.ebuild | 5 ++++-
15 2 files changed, 8 insertions(+), 2 deletions(-)
16
17 diff --git a/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild b/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild
18 index ac987b2..111bb37 100644
19 --- a/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild
20 +++ b/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild
21 @@ -8,7 +8,7 @@ LIBTOOLIZE="true"
22 TEST_PV="4.0.4"
23 MANUAL_PV="4.5.3"
24
25 -inherit autotools-utils bash-completion flag-o-matic multilib toolchain-funcs
26 +inherit autotools-utils bash-completion eutils flag-o-matic multilib toolchain-funcs
27
28 SRC_URI="test? ( ftp://ftp.gromacs.org/pub/tests/gmxtest-${TEST_PV}.tgz )
29 doc? (
30 @@ -52,6 +52,9 @@ QA_EXECSTACK="usr/lib/libgmx.so.*
31 usr/lib/libgmx_d.so.*"
32
33 src_prepare() {
34 + #add user patches from /etc/portage/patches/sci-chemistry/gromacs
35 + epatch_user
36 +
37 if use mpi && use threads; then
38 elog "mdrun uses only threads OR mpi, and gromacs favours the"
39 elog "use of mpi over threads, so a mpi-version of mdrun will"
40
41 diff --git a/sci-chemistry/gromacs/gromacs-9999.ebuild b/sci-chemistry/gromacs/gromacs-9999.ebuild
42 index b6f5119..15dbf24 100644
43 --- a/sci-chemistry/gromacs/gromacs-9999.ebuild
44 +++ b/sci-chemistry/gromacs/gromacs-9999.ebuild
45 @@ -10,7 +10,7 @@ TEST_PV="4.0.4"
46 EGIT_REPO_URI="git://git.gromacs.org/gromacs"
47 EGIT_BRANCH="master"
48
49 -inherit bash-completion cmake-utils git multilib toolchain-funcs
50 +inherit bash-completion cmake-utils eutils git multilib toolchain-funcs
51
52 DESCRIPTION="The ultimate molecular dynamics simulation package"
53 HOMEPAGE="http://www.gromacs.org/"
54 @@ -44,6 +44,9 @@ QA_EXECSTACK="usr/lib/libgmx.so.*
55 usr/lib/libgmx_d.so.*"
56
57 src_prepare() {
58 + #add user patches from /etc/portage/patches/sci-chemistry/gromacs
59 + epatch_user
60 +
61 if use mpi && use threads; then
62 elog "mdrun uses only threads OR mpi, and gromacs favours the"
63 elog "use of mpi over threads, so a mpi-version of mdrun will"