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xarthisius 10/09/09 09:36:17 |
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Added: dialign-tx-1.0.2-implicits.patch |
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Log: |
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Respect LDFLAGS wrt bug 336533. Thanks to Diego for the report. Fix implicit function declarations. |
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(Portage version: 2.2_rc77/cvs/Linux x86_64) |
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Revision Changes Path |
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1.1 sci-biology/dialign-tx/files/dialign-tx-1.0.2-implicits.patch |
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file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/files/dialign-tx-1.0.2-implicits.patch?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/files/dialign-tx-1.0.2-implicits.patch?rev=1.1&content-type=text/plain |
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Index: dialign-tx-1.0.2-implicits.patch |
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=================================================================== |
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--- source/museq.c |
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+++ source/museq.c |
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@@ -38,6 +38,7 @@ |
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//extern void calc_weight(struct diag* dg, struct scr_matrix* smatrix, |
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// struct prob_dist *pdist); |
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//extern struct diag_col *create_diag_col(int seq_amount); |
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+extern void free_diag(struct diag* dg); |
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extern void free_diag_col(struct diag_col* dcol); |
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extern struct diag_col *find_all_diags(struct scr_matrix *smatrix, |
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struct prob_dist *pdist, |
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@@ -52,6 +53,7 @@ |
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// alig.c |
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extern struct alignment* create_empty_alignment(struct seq_col *scol); |
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+extern void free_alignment(struct alignment *algn); |
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//extern char adapt_diag(struct alignment *algn, struct scr_matrix *smatrix, struct diag* dg); |
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extern int simple_aligner(struct seq_col *scol, struct diag_col *dcol, |
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struct scr_matrix* smatrix, |
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