Gentoo Archives: gentoo-commits

From: "Andrey Kislyuk (weaver)" <weaver@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/bedtools: bedtools-2.15.0.ebuild ChangeLog
Date: Mon, 02 Jan 2012 22:13:44
Message-Id: 20120102221324.A68CC2004C@flycatcher.gentoo.org
1 weaver 12/01/02 22:13:24
2
3 Modified: ChangeLog
4 Added: bedtools-2.15.0.ebuild
5 Log:
6 Version bump
7
8 (Portage version: 2.2.0_alpha74/cvs/Linux x86_64)
9
10 Revision Changes Path
11 1.2 sci-biology/bedtools/ChangeLog
12
13 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/ChangeLog?rev=1.2&view=markup
14 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/ChangeLog?rev=1.2&content-type=text/plain
15 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/ChangeLog?r1=1.1&r2=1.2
16
17 Index: ChangeLog
18 ===================================================================
19 RCS file: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v
20 retrieving revision 1.1
21 retrieving revision 1.2
22 diff -u -r1.1 -r1.2
23 --- ChangeLog 9 Oct 2011 04:01:53 -0000 1.1
24 +++ ChangeLog 2 Jan 2012 22:13:24 -0000 1.2
25 @@ -1,6 +1,11 @@
26 # ChangeLog for sci-biology/bedtools
27 -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
28 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.1 2011/10/09 04:01:53 weaver Exp $
29 +# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
30 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.2 2012/01/02 22:13:24 weaver Exp $
31 +
32 +*bedtools-2.15.0 (02 Jan 2012)
33 +
34 + 02 Jan 2012; Andrey Kislyuk <weaver@g.o> +bedtools-2.15.0.ebuild:
35 + Version bump
36
37 *bedtools-2.13.3 (09 Oct 2011)
38
39
40
41
42 1.1 sci-biology/bedtools/bedtools-2.15.0.ebuild
43
44 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/bedtools-2.15.0.ebuild?rev=1.1&view=markup
45 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/bedtools-2.15.0.ebuild?rev=1.1&content-type=text/plain
46
47 Index: bedtools-2.15.0.ebuild
48 ===================================================================
49 # Copyright 1999-2012 Gentoo Foundation
50 # Distributed under the terms of the GNU General Public License v2
51 # $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/bedtools-2.15.0.ebuild,v 1.1 2012/01/02 22:13:24 weaver Exp $
52
53 EAPI=4
54
55 inherit flag-o-matic
56
57 DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, and SAM/BAM file formats"
58 HOMEPAGE="http://code.google.com/p/bedtools/"
59 SRC_URI="http://bedtools.googlecode.com/files/BEDTools.v${PV}.tar.gz"
60
61 LICENSE="GPL-2"
62 SLOT="0"
63 KEYWORDS="~x86 ~amd64"
64 IUSE=""
65
66 S="${WORKDIR}/BEDTools-Version-${PV}"
67
68 src_prepare() {
69 filter-ldflags -Wl,--as-needed
70 sed -i \
71 -e '/export CXXFLAGS/ d' \
72 -e '/export CXX/ d' \
73 Makefile || die
74 }
75
76 src_install() {
77 dobin bin/*
78 dodoc README* RELEASE_HISTORY
79 insinto /usr/share/${PN}
80 doins -r genomes
81 }