[gentoo-commits] gentoo-x86 commit in sci-biology/allpathslg: ChangeLog allpathslg-35725-r1.ebuild allpathslg-35725.ebuild

[Andrey Kislyuk (weaver)]

weaver      11/01/27 16:23:34

  Modified:             ChangeLog
  Added:                allpathslg-35725-r1.ebuild
  Removed:              allpathslg-35725.ebuild
  Log:
  Drop ~x86, avoid collision with sci-biology/vaal
  
  (Portage version: 2.2_rc86/cvs/Linux x86_64)

Revision  Changes    Path
1.2                  sci-biology/allpathslg/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?r1=1.1&r2=1.2

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- ChangeLog	25 Jan 2011 16:51:48 -0000	1.1
+++ ChangeLog	27 Jan 2011 16:23:34 -0000	1.2
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/allpathslg
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.1 2011/01/25 16:51:48 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.2 2011/01/27 16:23:34 weaver Exp $
+
+*allpathslg-35725-r1 (27 Jan 2011)
+
+  27 Jan 2011; Andrey Kislyuk <weaver@g.o> -allpathslg-35725.ebuild,
+  +allpathslg-35725-r1.ebuild:
+  Drop ~x86, avoid collision with sci-biology/vaal
 
 *allpathslg-35725 (25 Jan 2011)
 



1.1                  sci-biology/allpathslg/allpathslg-35725-r1.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-35725-r1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-35725-r1.ebuild?rev=1.1&content-type=text/plain

Index: allpathslg-35725-r1.ebuild
===================================================================
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-35725-r1.ebuild,v 1.1 2011/01/27 16:23:34 weaver Exp $

EAPI="2"

inherit autotools

DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz"

LICENSE="as-is"
SLOT="0"
IUSE=""
KEYWORDS="~amd64"

DEPEND="dev-libs/boost
	>=sys-devel/gcc-4.3.3
	sci-biology/vaal"
RDEPEND=""

src_prepare() {
	eautoreconf
}

src_install() {
	einstall || die
	# Provided by sci-biology/vaal
	for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
		rm "${D}/usr/bin/$i" || die
	done
}