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markusle 08/10/11 17:29:20 |
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|
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Modified: ChangeLog |
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Added: apbs-1.0.0-r1.ebuild |
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Removed: apbs-1.0.0.ebuild |
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Log: |
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Version bump to pull in updated patch fixing bad install location for docs (see bug #241316). Added patch for ignored LDFLAGS. |
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(Portage version: 2.2_rc11/cvs/Linux 2.6.26-SENTINEL-2 i686) |
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|
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Revision Changes Path |
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1.19 sci-chemistry/apbs/ChangeLog |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.19&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.19&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?r1=1.18&r2=1.19 |
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v |
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retrieving revision 1.18 |
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retrieving revision 1.19 |
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diff -u -r1.18 -r1.19 |
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--- ChangeLog 29 Apr 2008 22:21:19 -0000 1.18 |
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+++ ChangeLog 11 Oct 2008 17:29:20 -0000 1.19 |
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@@ -1,6 +1,15 @@ |
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# ChangeLog for sci-chemistry/apbs |
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# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.18 2008/04/29 22:21:19 markusle Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.19 2008/10/11 17:29:20 markusle Exp $ |
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+ |
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+*apbs-1.0.0-r1 (11 Oct 2008) |
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+ |
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+ 11 Oct 2008; Markus Dittrich <markusle@g.o> |
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+ +files/apbs-1.0.0-LDFLAGS.patch, |
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+ files/apbs-1.0.0-install-fix.patch, -apbs-1.0.0.ebuild, |
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+ +apbs-1.0.0-r1.ebuild: |
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+ Version bump to pull in updated patch fixing bad install location |
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+ for docs (see bug #241316). Added patch for ignored LDFLAGS. |
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|
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*apbs-1.0.0 (29 Apr 2008) |
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1.1 sci-chemistry/apbs/apbs-1.0.0-r1.ebuild |
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/apbs-1.0.0-r1.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/apbs-1.0.0-r1.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: apbs-1.0.0-r1.ebuild |
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=================================================================== |
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# Copyright 1999-2008 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.0.0-r1.ebuild,v 1.1 2008/10/11 17:29:20 markusle Exp $ |
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inherit eutils fortran autotools |
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|
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MY_P="${P}-source" |
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S="${WORKDIR}"/"${MY_P}" |
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|
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DESCRIPTION=" Software for evaluating the electrostatic properties of nanoscale biomolecular systems" |
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LICENSE="BSD" |
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HOMEPAGE="http://agave.wustl.edu/apbs/" |
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SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz" |
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|
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SLOT="0" |
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IUSE="blas mpi python doc" |
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KEYWORDS="~ppc ~x86 ~amd64" |
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|
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DEPEND="blas? ( virtual/blas ) |
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python? ( dev-lang/python ) |
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sys-libs/readline |
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mpi? ( virtual/mpi )" |
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|
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FORTRAN="g77 gfortran" |
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|
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pkg_setup() { |
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# It is important that you use the same compiler to compile |
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# APBS that you used when compiling MPI. |
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fortran_pkg_setup |
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} |
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|
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src_unpack() { |
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unpack ${A} |
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cd "${S}" |
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epatch "${FILESDIR}"/${P}-openmpi.patch |
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epatch "${FILESDIR}"/${P}-install-fix.patch |
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epatch "${FILESDIR}"/${P}-libmaloc-noinstall.patch |
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epatch "${FILESDIR}"/${P}-LDFLAGS.patch |
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eautoreconf |
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} |
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|
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src_compile() { |
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local myconf="--docdir=/usr/share/doc/${PF}" |
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use blas && myconf="${myconf} --with-blas=-lblas" |
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|
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# check which mpi version is installed and tell configure |
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if use mpi; then |
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if has_version sys-cluster/mpich; then |
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myconf="${myconf} --with-mpich=/usr" |
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elif has_version sys-cluster/mpich2; then |
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myconf="${myconf} --with-mpich2=/usr" |
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elif has_version sys-cluster/lam-mpi; then |
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myconf="${myconf} --with-lam=/usr" |
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elif has_version sys-cluster/openmpi; then |
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myconf="${myconf} --with-openmpi=/usr" |
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fi |
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fi || die "Failed to select proper mpi implementation" |
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|
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econf $(use_enable python) \ |
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${myconf} || die "configure failed" |
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|
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emake -j1 || die "make failed" |
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} |
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|
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src_test() { |
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cd examples && make test \ |
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|| die "Tests failed" |
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} |
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|
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src_install() { |
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make DESTDIR="${D}" install || die "make install failed" |
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dodoc AUTHORS INSTALL README NEWS ChangeLog \ |
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|| die "Failed to install docs" |
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} |
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