[gentoo-commits] proj/sci:master commit in: sci-chemistry/chimera-bin/

[Alexey Shvetsov]

commit:     cbedd96c2be91aaede98b5e1105ae8652c7a0ab2
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 27 09:52:53 2014 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Fri Jun 27 09:52:53 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=cbedd96c

Update chimera to new version

Package-Manager: portage-2.2.10

---
 sci-chemistry/chimera-bin/ChangeLog              |  6 +-
 sci-chemistry/chimera-bin/chimera-bin-1.9.ebuild | 94 ++++++++++++++++++++++++
 2 files changed, 99 insertions(+), 1 deletion(-)

diff --git a/sci-chemistry/chimera-bin/ChangeLog b/sci-chemistry/chimera-bin/ChangeLog
index 0ff838c..6d37a9f 100644
--- a/sci-chemistry/chimera-bin/ChangeLog
+++ b/sci-chemistry/chimera-bin/ChangeLog
@@ -2,6 +2,11 @@
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*chimera-bin-1.9 (27 Jun 2014)
+
+  27 Jun 2014; Alexey Shvetsov <alexxy@g.o> +chimera-bin-1.9.ebuild:
+  Update chimera to new version
+
 *chimera-bin-1.8.1 (16 Jan 2014)
 
   16 Jan 2014; Justin Lecher <jlec@g.o> +chimera-bin-1.8.1.ebuild:
@@ -30,4 +35,3 @@
   20 Sep 2012; Justin Lecher <jlec@g.o> +chimera-bin-1.6.2.ebuild,
   +metadata.xml:
   New addition
-

diff --git a/sci-chemistry/chimera-bin/chimera-bin-1.9.ebuild b/sci-chemistry/chimera-bin/chimera-bin-1.9.ebuild
new file mode 100644
index 0000000..07734d6
--- /dev/null
+++ b/sci-chemistry/chimera-bin/chimera-bin-1.9.ebuild
@@ -0,0 +1,94 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit eutils
+
+DESCRIPTION="An extensible Molecular Modelling System"
+HOMEPAGE="http://www.cgl.ucsf.edu/chimera"
+SRC_URI="
+	amd64? ( chimera-${PV}-linux_x86_64.bin )
+	x86? ( chimera-${PV}-linux.bin )"
+
+SLOT="0"
+LICENSE="chimera"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+DEPEND="prefix? ( dev-util/patchelf )"
+RDEPEND="
+	dev-lang/tcl
+	dev-lang/tk
+	dev-libs/expat
+	dev-libs/libotf
+	dev-libs/openssl:0
+	dev-libs/libpcre
+	sys-libs/zlib
+	media-libs/fontconfig
+	media-libs/freetype
+	media-libs/ftgl
+	media-libs/libpng:1.2
+	media-libs/tiff
+	media-libs/tiff:3
+	sci-libs/hdf5
+	sys-devel/gcc[openmp,fortran]
+	virtual/jpeg
+	virtual/glu
+	virtual/opengl
+	www-apps/swish-e
+	x11-libs/libX11
+	x11-libs/libICE
+	x11-libs/libXext
+	x11-libs/libXft
+	x11-libs/libXmu
+	x11-libs/libXpm
+	x11-libs/libXrender
+	x11-libs/libSM
+	x11-libs/libXt
+	|| ( x11-libs/libGLw <media-libs/mesa-8 )"
+
+S="${WORKDIR}"
+
+RESTRICT="fetch strip"
+
+QA_PREBUILT="opt/.*"
+
+pkg_nofetch() {
+	elog "Please visit"
+	elog "http://www.cgl.ucsf.edu/chimera/download.html"
+	elog "and download ${A} into ${DISTDIR}"
+}
+
+src_unpack() {
+	cp "${DISTDIR}"/${A} ${A}.zip
+	unzip ${A}.zip || die
+}
+
+src_install() {
+	chmod +x ./chimera.bin
+	dodir /opt/
+	./chimera.bin -d foo || die
+	doicon foo/chimeraIcon.png
+	mv foo "${ED}/opt/${PN}" || die
+
+	cat >> "${T}"/chimera <<- EOF
+	#!${EPREFX}/bin/bash
+
+	export PATH="${EPREFIX}/opt/${PN}/bin:\${PATH}"
+	"${EPREFIX}/opt/${PN}/bin/chimera" \$@
+	EOF
+
+	exeinto /opt/bin/
+	doexe "${T}"/chimera
+
+	make_desktop_entry "${EPREFIX}/opt/bin/chimera" Chimera chimeraIcon
+
+	if use prefix; then
+		local i
+		for i in "${ED}"/opt/${PN}/bin/{tiffcp,povray,al2co} "${ED}"/opt/${PN}/lib/*.so; do
+			patchelf --set-rpath "${EPREFIX}/usr/lib:${EPREFIX}/opt/${PN}/lib" "${i}" || die
+		done
+	fi
+}