Gentoo Archives: gentoo-commits

From: "Michał Górny" <mgorny@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/numpy/
Date: Wed, 28 Aug 2019 13:39:53
Message-Id: 1566999583.eebcead66420250a3753a9196890c8e03b916164.mgorny@gentoo
1 commit: eebcead66420250a3753a9196890c8e03b916164
2 Author: Michał Górny <mgorny <AT> gentoo <DOT> org>
3 AuthorDate: Wed Aug 28 07:23:39 2019 +0000
4 Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
5 CommitDate: Wed Aug 28 13:39:43 2019 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=eebcead6
7
8 dev-python/numpy: Bump to 1.16.5
9
10 Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>
11
12 dev-python/numpy/Manifest | 4 +
13 dev-python/numpy/numpy-1.16.5.ebuild | 156 +++++++++++++++++++++++++++++++++++
14 2 files changed, 160 insertions(+)
15
16 diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest
17 index 7df64371849..d1b4c64c85e 100644
18 --- a/dev-python/numpy/Manifest
19 +++ b/dev-python/numpy/Manifest
20 @@ -1,16 +1,20 @@
21 DIST numpy-1.14.5.zip 4904624 BLAKE2B 14d266bf1139b9539e39d08a6537e2b772e80bf46a0769cbb06b63ba54858c9284f6d0e8a19627a4d99f2c2638e9a4031bf4d4aaf773eaf34b7203d131636dc0 SHA512 e131f9fa815084e334b59c5d9abd8de0088ad1dfefecf8615ad7deca0b54b0dfa0446c8de99c90670ea9fcabea9980bd171618a5b9032c1937b597a5ce363c5b
22 DIST numpy-1.15.4.zip 4473522 BLAKE2B c030ef4a06c84091eec11b6602422468bd0674489a2c7fea1230132cd3a3ca1b10ec87eeb6788f2f263943f9ac43026dc1e7f0f5f1d52e9d1cc6934a5d361090 SHA512 9e0516da04368f0353fb7e3cc2c72e1ec936042908309732a298405bd7111e712899627b82f3674295b611e0ebfd74ef91d693f065fe9cb03dc7de23d1e72676
23 DIST numpy-1.16.1.zip 5070040 BLAKE2B 0429d27d88ec97e207822c9c7fa759453bbef97d1d5fdf3e68dab21ca098a6321e2e57d85561dd99084d190b8ed6fce20f00b421c8d14a249fc45dc1ea09569e SHA512 e4adce4f40a3cb6ac482f82db9fcd079179b03b0e878920cfc7d98b9f622adab997c68af892b209f417d5f31b4123a1c5ff5c07cf5b0aaa496d8be6c8354bde8
24 +DIST numpy-1.16.5.zip 5138208 BLAKE2B f5511650e66939a6ce21cfad7874aecdeb6c07a70b32419a808956e42c7819d82bb364f1632da91b4d8a5237001c8ae3cbdcac10651fa0acca9558bdeafb5437 SHA512 6dd790ff57fdb7e7b0bddb47ea2b70b2667edefe632548ec68934e12a16af4a51bed9726e495c4993aad4c448dc4a204d0a087577d43dcfc9fa0164eb1d4b898
25 DIST numpy-1.8.2.tar.gz 3792998 BLAKE2B 00d22c72ab6f919626d3fba0edc477fb9c19f9c299f78cff6102e1860e3d1baec8f3b17aa23be797e9a34630428174de3f3b630c3f05c5340024dc6314fad8cd SHA512 996e6b8e2d42f223e44660f56bf73eb8ab124f400d89218f8f5e4d7c9860ada44a4d7c54526137b0695c7a10f36e8834fbf0d42b7cb20bcdb5d5c245d673385c
26 DIST numpy-html-1.14.5.zip 11197881 BLAKE2B 00cac3c5be07f644328acd9ed155a6fc07ed7d7380584732bb3ac03562c8705cd152612f461d5dc251dabe0be4ba45593165a961496e351110e1aa7598c37370 SHA512 578d31660de4e1f57310b3a2137cefea17228f40046eef1689fb6d9302f0fe0fda5aaf473c3b8c69ae781049950022321593ec891a5640e3c36c886ab3bf4383
27 DIST numpy-html-1.15.4.zip 11158615 BLAKE2B eb264cd51fd61b389e858300d96be63f8e2eeaa0b7346beac571b62d96867d6820c19d5043a6f81088dc52b1e4d7f3f295e02ff5ff90351b0feccf657ce90001 SHA512 1cad60013f374f456bbb1fb6161545a94e252205c28054f9b33cde65330772ab243339289517a8825957a21e210455d33bcc0b9c588052c49c88257b1b04facb
28 DIST numpy-html-1.16.1.zip 12132467 BLAKE2B 050a8cba160e36a4c547f1b67b8ab2b9220c9841a9f8343dce6f3221313505530a1687efa2116384a03d3bc9172a0298b4ea5ece2f423841d595e45f565ccbc2 SHA512 5af356313363e00f05db560902cc7578162c7d2ab9c1ef0f3713854682b63d76297d55eb9aac0dfc7f4b687ccea93a53462e2082ef1270e29e19680e1222b34d
29 +DIST numpy-html-1.16.4.zip 12097069 BLAKE2B db1f897342fbc80a761fbaee7b0eee3761dbfa04ef6c46a137bb2392caaec8256580467ce06498cceeada2639151a1ec75dafab484d64cb897c008727d6d32a5 SHA512 c44c5e1e0cb22f9dd46fe9e302030292d85e567456178fee296746a414271634e906509fb6665ac63fbfebdd13c5383574f0aa47b4fbc639063da31addc3316a
30 DIST numpy-html-1.8.1.zip 9703711 BLAKE2B 1f9d9cb4e65fc2f03d07da9bc34de9c8c4f93f5267689abccb0e2383b23babfed52ae6c3969738e78eeca7b32f49c90f9f7bb92dd432a6b87e082b67c1f214a5 SHA512 1d52c657931f4eebb5325159444aedd969b201f5098855058f1ef632dc8677372d632291154ebc3db9869cdb8abf7eb820eade1a9edba2d6be1ae918cb38c071
31 DIST numpy-ref-1.14.5.pdf 4855150 BLAKE2B aa924542346bd06b1aa8b11ceb8eb5de936cfdccc10a8339720a297e27b5b34961044eb8db8dd7b9a19ba93b3cbf76ec278a9a50724653aafd2b9d57a00007f2 SHA512 717f58fcb1aa66ecc5f5d4c11c9923d2beb21a1b1a0ca1e46f3622c69f1122fd0547b7f7abaf6de008e2aa988b2453af3c2590877f5596fb6642479ece651746
32 DIST numpy-ref-1.15.4.pdf 4843444 BLAKE2B 26154930a8c881f49e7eb7d9540d1deba27baed1acb15dbacd42a659c05f50605cd44b63b2474e66d1d22851145cc65b3e3f26302f8966e141cbd2afc666c654 SHA512 aebff74389e785bd588ccc287329aea4dbc3ef51b46fbffdf088853342fea724f79f712733e453877949e756a52e89de3b257e5feba86e830df84ed8f9bb0e30
33 DIST numpy-ref-1.16.1.pdf 5175448 BLAKE2B 5cd692a0fc825216560dbbf48738a49b794973d4539bd778f0f9a2f7f72b32d3061675f9a76db4cbfbb38eec0793c70046180fcb07e23ffc6177dee76b16bb92 SHA512 6cad03e30d7c2204fb899f4e4d1167fefade60d20dedf0ea87ac15c70139fbcca8789cdf17af5a2d221ba06eb78e9376b4b542621f9d78772041c83ab2405d1a
34 +DIST numpy-ref-1.16.4.pdf 5176571 BLAKE2B 9a875ebd1473b241d463d810a6d191581aef961158f2f82959671b554ace3ad482795e4f3e1cb7dd4632cff926c1e864c675a7624fb0f4e4f297948bf50f0564 SHA512 983ba0f34a70c011886bdbc9fd8f3f75a3a967ca29217acc76fa46e7da391296a5628c9a557ac76efb393271abfb8ee4f376d401c1cc1e5c30622e54b9325d09
35 DIST numpy-ref-1.8.1.pdf 5348248 BLAKE2B f087fbbd3c789adebd2902db0a2acc8a8748ccbb5a1e7e064effdc91e92c7dcf087ae36436fc52d7afa12a12ca2fc0f5f5617177bcd8b9745a7155acd10d71fc SHA512 340dd8f47430f24fea81bb3a8674e1a58f4290a9d1c5d64bac96d50b31a94a770e78381e42daf8b0a6a90cefe5cafe86b0c89f7cc7635a042a7e85eb74bdbdf5
36 DIST numpy-user-1.14.5.pdf 574418 BLAKE2B 80738f1760932fa74b07334d1a355ba3ce319e0b03fe1428d0b3497466fa1164ccbad84969cb7bc8daebb5525094f0d0c7710e1d661b1c6bbaca0669bfcbf875 SHA512 fb00305408c56ee203ed71ac042474592e7e933f14a639f6dce0f6dc80206c13b844c2425a919f9072a114c7af2c2f9f85b78a07ba3874259e5d173290e51a13
37 DIST numpy-user-1.15.4.pdf 596191 BLAKE2B 1387b7aac9cccba4b7ce259391f56372959db35c4ddce111afb9949347ebcf3290e7d3fb5b1b2d2e7850911259cddb07edfe104c1396ae8e31a58a81e9293f16 SHA512 2089753b48412f094b279c378be1d221ec9b171957171a4e26b4589d594e00b4f66b6f8a88a7eb665e8c3fa3e6ed505d63da80d4d01ced041544b97ea56fe212
38 DIST numpy-user-1.16.1.pdf 592508 BLAKE2B 88ef7aac2998fd8eeebc3ab92df9ad9ba139b67ab0442cd4ed91cdc7b1cd72acf7905468118df25634640b709106758455c7d316539b941d7760010b8135fafa SHA512 d089b4c663f92c38aa075c37974df757bdc457f75980737477a4477f67311d28149bc4c20f5d1cd0877221a78e5a9ff10702b1ebcc8ab062d328cdda4087d0f7
39 +DIST numpy-user-1.16.4.pdf 596203 BLAKE2B da3ad1f0ec1c965d20656f73a970911cbb58efa73a5df89e2e6485e0dd763f483e35eea1395ac919bf35d496fb216cee954fc5d31edebc1796a24a2a7a2d12b9 SHA512 3083008547213bfa98ffa5cd8e2cea13f6947f42d83aef61502a2a852b0d5f27d727c76b42d281d7a2f4f76c78e88b12ee3d9b164b39fe1f0213ace7097357d6
40 DIST numpy-user-1.8.1.pdf 408305 BLAKE2B 2956e42ebad45b021f72c7e71d357d953ea8a26639b4c6e81dbe1718052304ac5ce1a7f96646d94ad48bf737ddc6962fcbc304e31dfce32b85cb8165b0ada6e0 SHA512 9e646e89e7e67834fa596e43082b43842d1c59287d22fd8d20c9f0a1d3d56a518a08cc2c036de4972ad0d6d9d3c2f56e2210f76e7244d3f7547b5204d84d3c7c
41
42 diff --git a/dev-python/numpy/numpy-1.16.5.ebuild b/dev-python/numpy/numpy-1.16.5.ebuild
43 new file mode 100644
44 index 00000000000..2556eeee4f8
45 --- /dev/null
46 +++ b/dev-python/numpy/numpy-1.16.5.ebuild
47 @@ -0,0 +1,156 @@
48 +# Copyright 1999-2019 Gentoo Authors
49 +# Distributed under the terms of the GNU General Public License v2
50 +
51 +EAPI="7"
52 +
53 +PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
54 +PYTHON_REQ_USE="threads(+)"
55 +
56 +FORTRAN_NEEDED=lapack
57 +
58 +inherit distutils-r1 flag-o-matic fortran-2 multiprocessing toolchain-funcs
59 +
60 +DOC_PV="1.16.4"
61 +DESCRIPTION="Fast array and numerical python library"
62 +HOMEPAGE="https://www.numpy.org"
63 +SRC_URI="
64 + mirror://pypi/${PN:0:1}/${PN}/${P}.zip
65 + doc? (
66 + https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-html.zip -> numpy-html-${DOC_PV}.zip
67 + https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-ref.pdf -> numpy-ref-${DOC_PV}.pdf
68 + https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-user.pdf -> numpy-user-${DOC_PV}.pdf
69 + )"
70 +LICENSE="BSD"
71 +SLOT="0"
72 +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
73 +IUSE="doc lapack test"
74 +RESTRICT="!test? ( test )"
75 +
76 +RDEPEND="
77 + lapack? (
78 + virtual/cblas
79 + virtual/lapack
80 + )"
81 +DEPEND="${RDEPEND}"
82 +BDEPEND="app-arch/unzip
83 + dev-python/setuptools[${PYTHON_USEDEP}]
84 + lapack? ( virtual/pkgconfig )
85 + test? (
86 + dev-python/pytest[${PYTHON_USEDEP}]
87 + )"
88 +
89 +PATCHES=(
90 + "${FILESDIR}"/${PN}-1.15.4-no-hardcode-blas.patch
91 +)
92 +
93 +src_unpack() {
94 + default
95 + if use doc; then
96 + unzip -qo "${DISTDIR}"/numpy-html-${DOC_PV}.zip -d html || die
97 + fi
98 +}
99 +
100 +pc_incdir() {
101 + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \
102 + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
103 +}
104 +
105 +pc_libdir() {
106 + $(tc-getPKG_CONFIG) --libs-only-L $@ | \
107 + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
108 +}
109 +
110 +pc_libs() {
111 + $(tc-getPKG_CONFIG) --libs-only-l $@ | \
112 + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
113 + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
114 + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
115 +}
116 +
117 +python_prepare_all() {
118 + if use lapack; then
119 + append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)"
120 + local incdir="${EPREFIX}"/usr/include
121 + local libdir="${EPREFIX}"/usr/$(get_libdir)
122 + cat >> site.cfg <<-EOF || die
123 + [blas]
124 + include_dirs = $(pc_incdir cblas):${incdir}
125 + library_dirs = $(pc_libdir cblas blas):${libdir}
126 + blas_libs = $(pc_libs cblas blas)
127 + [lapack]
128 + library_dirs = $(pc_libdir lapack):${libdir}
129 + lapack_libs = $(pc_libs lapack)
130 + EOF
131 + else
132 + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None
133 + fi
134 +
135 + export CC="$(tc-getCC) ${CFLAGS}"
136 +
137 + append-flags -fno-strict-aliasing
138 +
139 + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573
140 + # with the subtle difference that we don't want to break Darwin where
141 + # -shared is not a valid linker argument
142 + if [[ ${CHOST} != *-darwin* ]]; then
143 + append-ldflags -shared
144 + fi
145 +
146 + # only one fortran to link with:
147 + # linking with cblas and lapack library will force
148 + # autodetecting and linking to all available fortran compilers
149 + append-fflags -fPIC
150 + if use lapack; then
151 + NUMPY_FCONFIG="config_fc --noopt --noarch"
152 + # workaround bug 335908
153 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95"
154 + fi
155 +
156 + # don't version f2py, we will handle it.
157 + sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die
158 +
159 + # disable fuzzed tests
160 + find numpy/*/tests -name '*.py' -exec sed -i \
161 + -e 's:def \(.*_fuzz\):def _\1:' {} + || die
162 + # very memory- and disk-hungry
163 + sed -i -e 's:test_large_zip:_&:' numpy/lib/tests/test_io.py || die
164 +
165 + distutils-r1_python_prepare_all
166 +}
167 +
168 +python_compile() {
169 + export MAKEOPTS=-j1 #660754
170 +
171 + local python_makeopts_jobs=""
172 + python_is_python3 || python_makeopts_jobs="-j $(makeopts_jobs)"
173 + distutils-r1_python_compile \
174 + ${python_makeopts_jobs} \
175 + ${NUMPY_FCONFIG}
176 +}
177 +
178 +python_test() {
179 + distutils_install_for_testing --single-version-externally-managed \
180 + --record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG}
181 +
182 + cd "${TMPDIR}" || die
183 +
184 + "${EPYTHON}" -c "
185 +import numpy, sys
186 +r = numpy.test(label='full', verbose=3)
187 +sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}"
188 +}
189 +
190 +python_install() {
191 + distutils-r1_python_install ${NUMPY_FCONFIG}
192 +}
193 +
194 +python_install_all() {
195 + local DOCS=( THANKS.txt )
196 +
197 + if use doc; then
198 + local HTML_DOCS=( "${WORKDIR}"/html/. )
199 + DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf )
200 + fi
201 +
202 + distutils-r1_python_install_all
203 +}