[gentoo-commits] proj/sci:master commit in: sci-libs/atlas/

[Sebastien Fabbro]

commit:     4d8b1e647052cc50f0dfc4c65a3ca55c96f5bdc7
Author:     Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Wed May 22 19:20:31 2013 +0000
Commit:     Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Wed May 22 19:20:31 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=4d8b1e64

Cleanup

Package-Manager: portage-2.2.01.21938-prefix

---
 sci-libs/atlas/ChangeLog           |    4 +
 sci-libs/atlas/atlas-3.10.1.ebuild |  281 ------------------------------------
 sci-libs/atlas/metadata.xml        |   12 +-
 3 files changed, 10 insertions(+), 287 deletions(-)

diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index c010571..0ac8999 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  22 May 2013; Sébastien Fabbro <bicatali@g.o> -atlas-3.10.1.ebuild,
+  metadata.xml:
+  Cleanup
+
   25 Feb 2013; Sébastien Fabbro <bicatali@g.o> atlas-3.10.1-r1.ebuild:
   sci-libs/atlas: Switched threads libraries to Libs.private in pkg-config files
 

diff --git a/sci-libs/atlas/atlas-3.10.1.ebuild b/sci-libs/atlas/atlas-3.10.1.ebuild
deleted file mode 100644
index d9da19e..0000000
--- a/sci-libs/atlas/atlas-3.10.1.ebuild
+++ /dev/null
@@ -1,281 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-FORTRAN_NEEDED=fortran
-inherit eutils toolchain-funcs fortran-2 versionator alternatives-2 multilib
-
-LAPACKP=lapack-3.4.2.tgz
-
-DESCRIPTION="Automatically Tuned Linear Algebra Software"
-HOMEPAGE="http://math-atlas.sourceforge.net/"
-SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
-	fortran? ( lapack? ( http://www.netlib.org/lapack/${LAPACKP} ) )"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="fortran doc generic lapack static-libs threads"
-
-RDEPEND=""
-DEPEND="${RDEPEND}
-	!prefix? ( sys-power/cpufrequtils )"
-
-S="${WORKDIR}/ATLAS"
-
-pkg_setup() {
-	if [[ -n $(type -P cpufreq-info) ]]; then
-		[[ -z $(cpufreq-info -d) ]] && return
-		local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
-		local cpu=0
-		while [[ ${cpu} -lt ${ncpu} ]]; do
-			if ! $(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance); then
-				ewarn "CPU $cpu is not set to performance"
-				ewarn "Run cpufreq-set -r -g performance as root"
-				die "${PN} needs all cpu set to performance"
-			fi
-			cpu=$((cpu + 1))
-		done
-	else
-		ewarn "Please make sure to disable CPU throttling completely"
-		ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
-		ewarn "generated timings will be completely random and the"
-		ewarn "performance of the resulting libraries will be degraded"
-		ewarn "considerably."
-	fi
-	use fortran && fortran-2_pkg_setup
-}
-
-src_prepare() {
-	epatch "${FILESDIR}"/${PN}-3.10.0-x32-support.patch
-}
-
-src_configure() {
-	# hack needed to trick the flaky gcc detection
-	local mycc="$(type -P $(tc-getCC))"
-	[[ ${mycc} == *gcc* ]] && mycc=gcc
-	atlas_configure() {
-		local myconf=(
-			--prefix="${ED}/usr"
-			--libdir="${ED}/usr/$(get_libdir)"
-			--incdir="${ED}/usr/include"
-			--cc="$(tc-getCC)"
-			"-D c -DWALL"
-			"-C acg '${mycc}'"
-			"-F acg '${CFLAGS}'"
-			"-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
-		)
-
-		# OpenMP shown to decreased performance over POSIX threads
-		# (at least in 3.9.x, see atlas-dev mailing list)
-		if use threads; then
-			if use generic; then # 2 threads is most generic
-				myconf+=( "-t 2" "-Si omp 0" )
-			else
-				myconf+=( "-t -1" "-Si omp 0" )
-			fi
-		else
-			myconf+=( "-t  0" "-Si omp 0" )
-		fi
-
-		if use amd64 || use ppc64 || use sparc; then
-			if [ ${ABI} = amd64 ] || [ ${ABI} = ppc64 ] || [ ${ABI} = sparc64 ] ; then
-				myconf+=( "-b 64" )
-			elif [ ${ABI} = x86 ] || [ ${ABI} = ppc ] || [ ${ABI} = sparc32 ] ; then
-				myconf+=( "-b 32" )
-			elif [ ${ABI} = x32 ] ; then
-				myconf+=( "-b 48" )
-			else
-				myconf+=( "-b 64" )
-			fi
-		elif use ppc || use x86; then
-			myconf+=( "-b 32" )
-		elif use ia64; then
-			myconf+=( "-b 64" )
-		fi
-		if use fortran; then
-			myconf+=(
-				"-C if '$(type -P $(tc-getFC))'"
-				"-F if '${FFLAGS}'"
-			)
-			if use lapack; then
-				myconf+=(
-					"-Si latune 1"
-					"--with-netlib-lapack-tarfile=${DISTDIR}/${LAPACKP}"
-				)
-			else
-				myconf+=( "-Si latune 0" )
-			fi
-		else
-			myconf+=( "-Si latune 0" "--nof77" )
-		fi
-		# generic stuff found by make make xprint_enums in atlas build dir
-		# basically assuming sse2+sse1 and 2 threads max
-		use generic && use x86   && myconf+=( "-V 384 -A 13")
-		use generic && use amd64 && myconf+=( "-V 384 -A 24")
-
-		local confdir="${S}_${1}"; shift
-		myconf+=( $@ )
-		mkdir "${confdir}" && cd "${confdir}"
-		# for debugging
-		echo ${myconf[@]} > myconf.out
-		"${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
-	}
-
-	atlas_configure shared "-Fa alg -fPIC" ${EXTRA_ECONF}
-	use static-libs && atlas_configure static ${EXTRA_ECONF}
-}
-
-src_compile() {
-	atlas_compile() {
-		pushd "${S}_${1}" > /dev/null
-		# atlas does its own parallel builds
-		emake -j1 build
-		cd lib
-		emake libclapack.a
-		[[ -e libptcblas.a ]] && emake libptclapack.a
-		popd > /dev/null
-	}
-
-	atlas_compile shared
-	use static-libs && atlas_compile static
-}
-
-src_test() {
-	cd "${S}_shared"
-	emake -j1 check time
-}
-
-# transform a static archive into a shared library and install them
-# atlas_install_libs <mylib.a> [extra link flags]
-atlas_install_libs() {
-	local libname=$(basename ${1%.*})
-	einfo "Installing ${libname}"
-	local soname=${libname}.so.$(get_major_version)
-	shift
-	pushd "${S}_shared"/lib > /dev/null
-	${LINK:-$(tc-getCC)} ${LDFLAGS} -shared -Wl,-soname=${soname} \
-		-Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
-		"$@" -o ${soname} || die "Creating ${soname} failed"
-	dolib.so ${soname}
-	ln -s ${soname} ${soname%.*}
-	dosym ${soname} /usr/$(get_libdir)/${soname%.*}
-	popd > /dev/null
-	use static-libs && dolib.a "${S}_static"/lib/${libname}.a
-}
-
-# create and install a pkgconfig file
-# atlas_install_pc <libname> <pkg name> [extra link flags]
-atlas_install_pc() {
-	local libname=${1} ; shift
-	local pcname=${1} ; shift
-	cat <<-EOF > ${pcname}.pc
-		prefix=${EPREFIX}/usr
-		libdir=\${prefix}/$(get_libdir)
-		includedir=\${prefix}/include
-		Name: ${pcname}
-		Description: ${PN} ${pcname}
-		Version: ${PV}
-		URL: ${HOMEPAGE}
-		Libs: -L\${libdir} -l${libname} $@
-		Cflags: -I\${includedir}/${PN}
-		${PCREQ}
-	EOF
-	insinto /usr/$(get_libdir)/pkgconfig
-	doins ${pcname}.pc
-}
-
-src_install() {
-	cd "${S}_shared/lib"
-	# rename to avoid collision with other packages
-	local l
-	for l in {,c}{blas,lapack}; do
-		if [[ -e lib${l}.a ]]; then
-			mv lib{,atl}${l}.a
-			use static-libs && mv "${S}"_static/lib/lib{,atl}${l}.a
-		fi
-	done
-
-	[[ -e libptcblas.a ]] && PTLIBS="-lpthread"
-
-	# atlas
-	atlas_install_libs libatlas.a -lm ${PTLIBS}
-
-	# cblas
-	atlas_install_libs libatlcblas.a -lm -L. -latlas
-	atlas_install_pc atlcblas atlas-cblas -lm -latlas
-	alternatives_for cblas atlas 0 \
-		/usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas.pc \
-		/usr/include/cblas.h atlas/cblas.h
-
-	# cblas threaded
-	if [[ -e libptcblas.a ]]; then
-		atlas_install_libs libptcblas.a -lm -L. -latlas ${PTLIBS}
-		atlas_install_pc ptcblas atlas-cblas-threads -lm -latlas ${PTLIBS}
-		alternatives_for cblas atlas-threads 0 \
-			/usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas-threads.pc \
-			/usr/include/cblas.h atlas/cblas.h
-	fi
-
-	if use lapack; then
-		PCREQ="Requires: cblas"
-		# clapack
-		atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
-		atlas_install_pc atlclapack atlas-clapack -lm -latlas
-
-		# clapack threaded
-		if [[ -e libptclapack.a ]]; then
-			atlas_install_libs libptclapack.a -lm -L. -latlas -lptcblas ${PTLIBS}
-			atlas_install_pc ptclapack atlas-clapack-threads -lm -latlas ${PTLIBS}
-		fi
-	fi
-
-	if use fortran; then
-		LINK=$(tc-getF77) PCREQ=
-
-		# blas
-		atlas_install_libs libf77blas.a -lm -L. -latlas
-		atlas_install_pc f77blas atlas-blas -lm -latlas
-		alternatives_for blas atlas 0 \
-			/usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas.pc
-
-		# blas threaded
-		if [[ -e libptf77blas.a ]]; then
-			atlas_install_libs libptf77blas.a -lm -L. -latlas ${PTLIBS}
-			atlas_install_pc ptf77blas atlas-blas-threads -lm -latlas ${PTLIBS}
-			alternatives_for blas atlas-threads 0 \
-				/usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas-threads.pc
-		fi
-
-		if use lapack; then
-			PCREQ="Requires: blas cblas"
-			# lapack
-			atlas_install_libs libatllapack.a \
-				-lm -L. -latlas -latlcblas -lf77blas
-			atlas_install_pc atllapack atlas-lapack -lm -latlas
-			alternatives_for lapack atlas 0 \
-				/usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack.pc
-			# lapack threaded
-			if [[ -e libptlapack.a ]]; then
-				atlas_install_libs libptlapack.a \
-					-lm -L. -latlas -lptcblas -lptf77blas ${PTLIBS}
-				atlas_install_pc ptlapack atlas-lapack-threads \
-					-lm -latlas ${PTLIBS}
-				alternatives_for lapack atlas-threads 0 \
-					/usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack-threads.pc
-			fi
-		fi
-	fi
-
-	cd "${S}"
-	insinto /usr/include/${PN}
-	doins include/*.h
-
-	cd "${S}/doc"
-	dodoc INDEX.txt AtlasCredits.txt ChangeLog
-	use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
-	use doc && use fortran && dodoc f77blas*pdf
-	use doc && use fortran && use lapack && dodoc *lapack*pdf
-}

diff --git a/sci-libs/atlas/metadata.xml b/sci-libs/atlas/metadata.xml
index b4b8088..2fddb01 100644
--- a/sci-libs/atlas/metadata.xml
+++ b/sci-libs/atlas/metadata.xml
@@ -3,12 +3,12 @@
 <pkgmetadata>
 <herd>sci</herd>
 <longdescription lang='en'>
-   ATLAS is an approach for the automatic generation and optimization of
-   numerical software. Currently ATLAS supplies optimized versions for the
-   complete set of linear algebra kernels known as the Basic Linear Algebra
-   Subroutines (BLAS) for both c and F77 interfaces. It can also build
-   a subset of the linear algebra routine LAPACK library or the full
-   LAPACK using the reference LAPACK from Netlib.
+  ATLAS is an approach for the automatic generation and optimization of
+  numerical software. Currently ATLAS supplies optimized versions for the
+  complete set of linear algebra kernels known as the Basic Linear Algebra
+  Subroutines (BLAS) for both c and F77 interfaces. It can also build
+  a subset of the linear algebra routine LAPACK library or the full
+  LAPACK using the reference LAPACK from Netlib.
 </longdescription>
 <use>
   <flag name='generic'>Build atlas assuming a fairly generic architecture (sse2 for x86, core2 for amd64)</flag>