Gentoo Archives: gentoo-commits

From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/rebase: metadata.xml ChangeLog rebase-1303.ebuild
Date: Thu, 28 Feb 2013 07:50:12
Message-Id: 20130228075008.2EC072171E@flycatcher.gentoo.org
1 jlec 13/02/28 07:50:08
2
3 Modified: metadata.xml ChangeLog
4 Added: rebase-1303.ebuild
5 Log:
6 sci-biology/rebase: Version Bump
7
8 (Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
9
10 Revision Changes Path
11 1.4 sci-biology/rebase/metadata.xml
12
13 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/metadata.xml?rev=1.4&view=markup
14 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/metadata.xml?rev=1.4&content-type=text/plain
15 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/metadata.xml?r1=1.3&r2=1.4
16
17 Index: metadata.xml
18 ===================================================================
19 RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/metadata.xml,v
20 retrieving revision 1.3
21 retrieving revision 1.4
22 diff -u -r1.3 -r1.4
23 --- metadata.xml 1 Sep 2009 21:04:48 -0000 1.3
24 +++ metadata.xml 28 Feb 2013 07:50:07 -0000 1.4
25 @@ -1,8 +1,8 @@
26 <?xml version="1.0" encoding="UTF-8"?>
27 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
28 <pkgmetadata>
29 - <herd>sci-biology</herd>
30 - <longdescription>
31 + <herd>sci-biology</herd>
32 + <longdescription>
33 The Restriction Enzyme data BASE is a collection of information about
34 restriction enzymes and related proteins. It is maintained by New
35 England Biolabs. It contains published and unpublished references,
36
37
38
39 1.115 sci-biology/rebase/ChangeLog
40
41 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.115&view=markup
42 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.115&content-type=text/plain
43 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?r1=1.114&r2=1.115
44
45 Index: ChangeLog
46 ===================================================================
47 RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v
48 retrieving revision 1.114
49 retrieving revision 1.115
50 diff -u -r1.114 -r1.115
51 --- ChangeLog 8 Mar 2012 07:15:15 -0000 1.114
52 +++ ChangeLog 28 Feb 2013 07:50:07 -0000 1.115
53 @@ -1,6 +1,12 @@
54 # ChangeLog for sci-biology/rebase
55 -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
56 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.114 2012/03/08 07:15:15 jlec Exp $
57 +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
58 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.115 2013/02/28 07:50:07 jlec Exp $
59 +
60 +*rebase-1303 (28 Feb 2013)
61 +
62 + 28 Feb 2013; Justin Lecher <jlec@g.o> +rebase-1303.ebuild,
63 + metadata.xml:
64 + Version Bump
65
66 08 Mar 2012; Justin Lecher <jlec@g.o> -rebase-1006.ebuild,
67 -rebase-1105.ebuild:
68
69
70
71 1.1 sci-biology/rebase/rebase-1303.ebuild
72
73 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1303.ebuild?rev=1.1&view=markup
74 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1303.ebuild?rev=1.1&content-type=text/plain
75
76 Index: rebase-1303.ebuild
77 ===================================================================
78 # Copyright 1999-2013 Gentoo Foundation
79 # Distributed under the terms of the GNU General Public License v2
80 # $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1303.ebuild,v 1.1 2013/02/28 07:50:08 jlec Exp $
81
82 EAPI=5
83
84 MY_PV=${PV#1}
85
86 DESCRIPTION="A restriction enzyme database"
87 HOMEPAGE="http://rebase.neb.com"
88 SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
89
90 SLOT="0"
91 LICENSE="public-domain"
92 KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
93 IUSE="emboss minimal"
94
95 RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
96 DEPEND="${RDEPEND}"
97
98 RESTRICT="binchecks strip"
99
100 src_compile() {
101 if use emboss; then
102 echo; einfo "Indexing Rebase for usage with EMBOSS."
103 mkdir REBASE
104 EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
105 -protofile proto.${MY_PV} -equivalences \
106 || die "Indexing Rebase failed."
107 echo
108 fi
109 }
110
111 src_install() {
112 if ! use minimal; then
113 insinto /usr/share/${PN}
114 doins withrefm.${MY_PV} proto.${MY_PV}
115 fi
116 newdoc REBASE.DOC README
117 if use emboss; then
118 insinto /usr/share/EMBOSS/data/REBASE
119 doins REBASE/embossre.{enz,ref,sup}
120 insinto /usr/share/EMBOSS/data
121 doins REBASE/embossre.equ
122 fi
123 }