Gentoo Archives: gentoo-commits

From: David Seifert <soap@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/amap/
Date: Sat, 25 Feb 2017 19:19:31
Message-Id: 1488050294.828db7aea56a4ca346c7f4d5282ed30006211180.soap@gentoo
1 commit: 828db7aea56a4ca346c7f4d5282ed30006211180
2 Author: David Seifert <soap <AT> gentoo <DOT> org>
3 AuthorDate: Sat Feb 25 17:55:37 2017 +0000
4 Commit: David Seifert <soap <AT> gentoo <DOT> org>
5 CommitDate: Sat Feb 25 19:18:14 2017 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=828db7ae
7
8 sci-biology/amap: Remove old
9
10 Package-Manager: Portage-2.3.3, Repoman-2.3.1
11
12 sci-biology/amap/amap-2.2-r2.ebuild | 50 -------------------------------------
13 1 file changed, 50 deletions(-)
14
15 diff --git a/sci-biology/amap/amap-2.2-r2.ebuild b/sci-biology/amap/amap-2.2-r2.ebuild
16 deleted file mode 100644
17 index 389102a8e7..0000000000
18 --- a/sci-biology/amap/amap-2.2-r2.ebuild
19 +++ /dev/null
20 @@ -1,50 +0,0 @@
21 -# Copyright 1999-2011 Gentoo Foundation
22 -# Distributed under the terms of the GNU General Public License v2
23 -# $Id$
24 -
25 -EAPI="2"
26 -
27 -inherit eutils toolchain-funcs java-pkg-opt-2 java-ant-2
28 -
29 -MY_P=${PN}.${PV}
30 -
31 -DESCRIPTION="Protein multiple-alignment-based sequence annealing"
32 -HOMEPAGE="http://bio.math.berkeley.edu/amap/"
33 -SRC_URI="http://baboon.math.berkeley.edu/${PN}/download/${MY_P}.tar.gz"
34 -
35 -LICENSE="GPL-2"
36 -SLOT="0"
37 -KEYWORDS="~amd64 ~x86"
38 -IUSE="java"
39 -
40 -RDEPEND="java? ( >=virtual/jre-1.5 )"
41 -DEPEND="java? ( >=virtual/jdk-1.5 )"
42 -
43 -S=${WORKDIR}/${PN}-align
44 -
45 -src_prepare() {
46 - epatch "${FILESDIR}"/${P}-makefile.patch \
47 - "${FILESDIR}"/${P}-includes.patch
48 -}
49 -
50 -src_compile() {
51 - emake -C align CXX="$(tc-getCXX)" \
52 - OPT_CXXFLAGS="${CXXFLAGS}" || die "make failed"
53 -
54 - if use java; then
55 - pushd "${S}"/display
56 - eant -Ddisplay all || die
57 - popd
58 - fi
59 -}
60 -
61 -src_install() {
62 - dobin align/${PN} || die
63 - dodoc align/{README,PROBCONS.README} || die
64 - insinto /usr/share/${PN}/examples
65 - doins examples/* || die
66 - if use java; then
67 - java-pkg_newjar "${S}"/display/AmapDisplay.jar amapdisplay.jar
68 - java-pkg_dolauncher amapdisplay --jar amapdisplay.jar
69 - fi
70 -}