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commit: 34151feaa9a7a76e95c5e1cc72fabc0d52480276 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Sun Mar 16 19:02:07 2014 +0000 |
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Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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CommitDate: Sat Mar 22 09:44:40 2014 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=34151fea |
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|
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sci-biology/samstat: new package |
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|
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Package-Manager: portage-2.2.7 |
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|
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--- |
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sci-biology/samstat/ChangeLog | 9 +++++++++ |
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sci-biology/samstat/metadata.xml | 9 +++++++++ |
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sci-biology/samstat/samstat-20130708.ebuild | 29 +++++++++++++++++++++++++++++ |
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3 files changed, 47 insertions(+) |
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|
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diff --git a/sci-biology/samstat/ChangeLog b/sci-biology/samstat/ChangeLog |
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new file mode 100644 |
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index 0000000..10d5f58 |
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--- /dev/null |
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+++ b/sci-biology/samstat/ChangeLog |
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@@ -0,0 +1,9 @@ |
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+# ChangeLog for sci-biology/samstat |
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+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: $ |
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+ |
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+*samstat-20130708 (16 Mar 2014) |
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+ |
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+ 16 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> +metadata.xml, |
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+ +samstat-20130708.ebuild: |
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+ sci-biology/samstat: new package |
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|
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diff --git a/sci-biology/samstat/metadata.xml b/sci-biology/samstat/metadata.xml |
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new file mode 100644 |
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index 0000000..2bc8930 |
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--- /dev/null |
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+++ b/sci-biology/samstat/metadata.xml |
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@@ -0,0 +1,9 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <herd>sci-biology</herd> |
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+ <maintainer> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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|
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diff --git a/sci-biology/samstat/samstat-20130708.ebuild b/sci-biology/samstat/samstat-20130708.ebuild |
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new file mode 100644 |
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index 0000000..c694799 |
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--- /dev/null |
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+++ b/sci-biology/samstat/samstat-20130708.ebuild |
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@@ -0,0 +1,29 @@ |
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+# Copyright 1999-2014 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=5 |
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+ |
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+inherit eutils |
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+ |
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+DESCRIPTION="Show statistics of BAM/SAM file contents (error profiles, nucleotide composition, base quals, length distribution)" |
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+HOMEPAGE="http://samstat.sourceforge.net" |
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+SRC_URI="http://sourceforge.net/projects/samstat/files/samstat.tgz" |
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+ |
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+LICENSE="GPL-3" |
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+SLOT="0" |
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+KEYWORDS="~amd64" |
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+IUSE="" |
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+ |
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+DEPEND="" |
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+RDEPEND="${DEPEND}" |
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+ |
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+S="${WORKDIR}"/"${PN}"/src |
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+ |
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+src_compile(){ |
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+ emake |
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+} |
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+ |
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+src_install(){ |
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+ dobin samstat |
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+} |