Gentoo Archives: gentoo-commits

From: Sebastien Fabbro <bicatali@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: /
Date: Tue, 26 Jul 2011 20:03:21
Message-Id: 16b19fd723bd06c73426480fa3dc9cbca23fcb5c.bicatali@gentoo
1 commit: 16b19fd723bd06c73426480fa3dc9cbca23fcb5c
2 Author: Sébastien Fabbro <sebfabbro <AT> gmail <DOT> com>
3 AuthorDate: Tue Jun 21 16:24:48 2011 +0000
4 Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
5 CommitDate: Tue Jun 21 16:24:48 2011 +0000
6 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=16b19fd7
7
8 Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci
9
10
11 dev-cpp/growler-link/ChangeLog | 5 +-
12 dev-cpp/growler-link/Manifest | 22 +--
13 dev-cpp/growler-link/growler-link-0.3.7.ebuild | 13 +-
14 dev-python/cvxopt/ChangeLog | 8 +
15 dev-python/cvxopt/Manifest | 17 +--
16 dev-python/cvxopt/cvxopt-1.1.3.ebuild | 28 +++-
17 dev-python/cvxopt/files/cvxopt-1.1.3-blas.patch | 76 ++++++++++
18 dev-python/cvxopt/metadata.xml | 3 +
19 dev-python/ffnet/ChangeLog | 5 +-
20 dev-python/ffnet/Manifest | 12 +-
21 dev-python/ffnet/ffnet-0.6.2.ebuild | 19 +--
22 dev-python/inference/ChangeLog | 8 +-
23 dev-python/inference/Manifest | 14 ++-
24 dev-python/inference/inference-0.4.ebuild | 15 +-
25 eclass/fortran-2.eclass | 154 --------------------
26 sci-biology/estscan/ChangeLog | 8 +
27 sci-biology/estscan/Manifest | 15 ++-
28 sci-biology/estscan/estscan-3.0.3.ebuild | 28 ++--
29 sci-biology/estscan/metadata.xml | 2 +
30 sci-biology/staden/ChangeLog | 8 +
31 sci-biology/staden/Manifest | 15 ++-
32 sci-biology/staden/staden-2.0.0_beta8.ebuild | 42 +++---
33 sci-biology/staden/staden-9999.ebuild | 38 ++---
34 sci-chemistry/ambertools/ChangeLog | 4 +
35 sci-chemistry/ambertools/Manifest | 16 ++-
36 sci-chemistry/ambertools/ambertools-1.4.ebuild | 24 ++--
37 sci-chemistry/ambertools/ambertools-1.5.ebuild | 24 ++--
38 sci-chemistry/gromacs/ChangeLog | 4 +
39 sci-chemistry/gromacs/Manifest | 16 +--
40 sci-chemistry/gromacs/gromacs-4.5.9999.ebuild | 2 +-
41 sci-chemistry/gromacs/gromacs-9999.ebuild | 2 +-
42 sci-chemistry/jana2000/ChangeLog | 5 +-
43 sci-chemistry/jana2000/Manifest | 12 +-
44 sci-chemistry/jana2000/jana2000-20071218.ebuild | 4 +-
45 sci-chemistry/smmp/ChangeLog | 5 +-
46 sci-chemistry/smmp/Manifest | 12 +-
47 sci-chemistry/smmp/smmp-3.0.5.ebuild | 9 +-
48 sci-electronics/tnt/ChangeLog | 3 +
49 sci-electronics/tnt/Manifest | 20 +--
50 sci-electronics/tnt/tnt-1.2.2.ebuild | 26 ++--
51 sci-libs/bigdft/ChangeLog | 4 +
52 sci-libs/bigdft/Manifest | 15 ++-
53 sci-libs/bigdft/bigdft-1.2.0.2.ebuild | 31 ++--
54 .../opal-client => sci-libs/bigdft}/metadata.xml | 1 +
55 sci-libs/cgnslib/ChangeLog | 3 +
56 sci-libs/cgnslib/Manifest | 14 ++-
57 sci-libs/cgnslib/cgnslib-2.5.4.ebuild | 17 ++-
58 sci-libs/etsf_io/ChangeLog | 4 +
59 sci-libs/etsf_io/Manifest | 17 ++-
60 sci-libs/etsf_io/etsf_io-1.0.3.ebuild | 21 +--
61 {app-text/dgs => sci-libs/etsf_io}/metadata.xml | 0
62 sci-libs/fftw/ChangeLog | 5 +-
63 sci-libs/fftw/Manifest | 12 +-
64 sci-libs/fftw/fftw-3.3_alpha1.ebuild | 12 +-
65 sci-libs/fgsl/ChangeLog | 5 +-
66 sci-libs/fgsl/Manifest | 14 ++-
67 sci-libs/fgsl/fgsl-0.9.3.ebuild | 4 +-
68 sci-libs/gmsh/ChangeLog | 4 +
69 sci-libs/gmsh/Manifest | 12 +-
70 sci-libs/gmsh/gmsh-2.5.0.ebuild | 17 ++-
71 sci-libs/gmsh/gmsh-9999.ebuild | 64 ++++----
72 sci-libs/hdf5/ChangeLog | 5 +-
73 sci-libs/hdf5/Manifest | 14 ++-
74 sci-libs/hdf5/hdf5-1.8.4-r2.ebuild | 5 +-
75 sci-libs/libxc/ChangeLog | 4 +
76 sci-libs/libxc/Manifest | 12 +-
77 sci-libs/libxc/libxc-1.0.ebuild | 14 +--
78 sci-libs/libxc/libxc-9999.ebuild | 12 +-
79 sci-libs/matio/ChangeLog | 5 +-
80 sci-libs/matio/Manifest | 14 ++-
81 sci-libs/matio/matio-1.3.4.ebuild | 4 +-
82 sci-libs/wannier90/ChangeLog | 4 +
83 sci-libs/wannier90/Manifest | 15 ++-
84 {app-text/dgs => sci-libs/wannier90}/metadata.xml | 0
85 sci-libs/wannier90/wannier90-1.2.ebuild | 23 ++-
86 sci-mathematics/algae/ChangeLog | 9 +-
87 sci-mathematics/algae/Manifest | 16 ++-
88 sci-mathematics/algae/algae-4.3.6.ebuild | 73 ++++------
89 sci-mathematics/algae/metadata.xml | 1 +
90 sci-mathematics/hypre/ChangeLog | 4 +
91 sci-mathematics/hypre/Manifest | 16 ++-
92 sci-mathematics/hypre/hypre-2.6.0b.ebuild | 2 +-
93 sci-mathematics/hypre/hypre-2.7.0b.ebuild | 2 +-
94 sci-mathematics/pest/ChangeLog | 5 +-
95 sci-mathematics/pest/Manifest | 12 +-
96 sci-mathematics/pest/pest-12.1.ebuild | 24 ++--
97 sci-mathematics/petsc/ChangeLog | 5 +
98 sci-mathematics/petsc/Manifest | 24 ++-
99 sci-mathematics/petsc/metadata.xml | 1 +
100 sci-mathematics/petsc/petsc-3.1_p4.ebuild | 4 +-
101 sci-mathematics/petsc/petsc-3.1_p5-r2.ebuild | 4 +-
102 sci-mathematics/petsc/petsc-3.1_p7.ebuild | 2 +-
103 sci-mathematics/petsc/petsc-3.1_p8-r1.ebuild | 12 +-
104 sci-mathematics/petsc/petsc-3.1_p8.ebuild | 2 +-
105 sci-physics/abinit/ChangeLog | 4 +
106 sci-physics/abinit/Manifest | 16 ++-
107 sci-physics/abinit/abinit-6.6.2.ebuild | 5 +-
108 sci-physics/abinit/abinit-6.6.3.ebuild | 6 +-
109 sci-physics/atompaw/ChangeLog | 4 +
110 sci-physics/atompaw/Manifest | 15 ++-
111 sci-physics/atompaw/atompaw-3.0.1.ebuild | 22 ++-
112 .../atompaw}/metadata.xml | 1 +
113 sci-physics/atompaw2abinit/ChangeLog | 4 +
114 sci-physics/atompaw2abinit/Manifest | 17 ++-
115 .../atompaw2abinit/atompaw2abinit-3.3.0.ebuild | 18 +-
116 .../atompaw2abinit}/metadata.xml | 0
117 sys-cluster/mpe2/ChangeLog | 5 +-
118 sys-cluster/mpe2/Manifest | 12 +-
119 sys-cluster/mpe2/mpe2-1.0.6_p1.ebuild | 6 +-
120 sys-cluster/mpich2/ChangeLog | 4 +
121 sys-cluster/mpich2/Manifest | 12 +-
122 sys-cluster/mpich2/mpich2-1.2.1_p1-r2.ebuild | 3 +-
123 sys-cluster/mpich2/mpich2-1.4_rc2-r1.ebuild | 3 +-
124 sys-cluster/openmpi/ChangeLog | 3 +
125 sys-cluster/openmpi/Manifest | 10 +-
126 sys-cluster/openmpi/openmpi-1.5.3.ebuild | 3 +-
127 sys-cluster/scalasca/ChangeLog | 3 +
128 sys-cluster/scalasca/Manifest | 14 +-
129 sys-cluster/scalasca/scalasca-1.3.3.ebuild | 2 +-
130 sys-infiniband/openib-mvapich2/ChangeLog | 7 +-
131 sys-infiniband/openib-mvapich2/Manifest | 20 ++--
132 .../openib-mvapich2/openib-mvapich2-0.9.5.ebuild | 28 ++--
133 .../openib-mvapich2/openib-mvapich2-0.9.6.ebuild | 28 ++--
134 .../openib-mvapich2-1.0.1-r1.ebuild | 27 ++--
135 .../openib-mvapich2/openib-mvapich2-1.0.1.ebuild | 32 ++--
136 .../openib-mvapich2/openib-mvapich2-1.0.ebuild | 32 ++--
137 126 files changed, 973 insertions(+), 761 deletions(-)