| 1 |
commit: 2cc25eba8953e7588222f389cd98339150273efb |
| 2 |
Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
| 3 |
AuthorDate: Sat Jun 1 17:22:43 2013 +0000 |
| 4 |
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
| 5 |
CommitDate: Sat Jun 1 17:22:43 2013 +0000 |
| 6 |
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2cc25eba |
| 7 |
|
| 8 |
sci-chemistry/aimless: New package |
| 9 |
|
| 10 |
Package-Manager: portage-2.2.0_alpha177 |
| 11 |
|
| 12 |
--- |
| 13 |
sci-chemistry/aimless/ChangeLog | 10 +++++ |
| 14 |
sci-chemistry/aimless/aimless-0.1.30.ebuild | 67 +++++++++++++++++++++++++++++ |
| 15 |
sci-chemistry/aimless/metadata.xml | 8 ++++ |
| 16 |
3 files changed, 85 insertions(+) |
| 17 |
|
| 18 |
diff --git a/sci-chemistry/aimless/ChangeLog b/sci-chemistry/aimless/ChangeLog |
| 19 |
new file mode 100644 |
| 20 |
index 0000000..84b9752 |
| 21 |
--- /dev/null |
| 22 |
+++ b/sci-chemistry/aimless/ChangeLog |
| 23 |
@@ -0,0 +1,10 @@ |
| 24 |
+# ChangeLog for sci-chemistry/aimless |
| 25 |
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
| 26 |
+# $Header: $ |
| 27 |
+ |
| 28 |
+*aimless-0.1.30 (01 Jun 2013) |
| 29 |
+ |
| 30 |
+ 01 Jun 2013; Justin Lecher <jlec@g.o> +aimless-0.1.30.ebuild, |
| 31 |
+ +metadata.xml: |
| 32 |
+ New package |
| 33 |
+ |
| 34 |
|
| 35 |
diff --git a/sci-chemistry/aimless/aimless-0.1.30.ebuild b/sci-chemistry/aimless/aimless-0.1.30.ebuild |
| 36 |
new file mode 100644 |
| 37 |
index 0000000..7662ece |
| 38 |
--- /dev/null |
| 39 |
+++ b/sci-chemistry/aimless/aimless-0.1.30.ebuild |
| 40 |
@@ -0,0 +1,67 @@ |
| 41 |
+# Copyright 1999-2013 Gentoo Foundation |
| 42 |
+# Distributed under the terms of the GNU General Public License v2 |
| 43 |
+# $Header: $ |
| 44 |
+ |
| 45 |
+EAPI=5 |
| 46 |
+ |
| 47 |
+inherit eutils multilib toolchain-funcs |
| 48 |
+ |
| 49 |
+DESCRIPTION="Scale together multiple observations of reflections" |
| 50 |
+HOMEPAGE="http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html" |
| 51 |
+SRC_URI="ftp://ftp.mrc-lmb.cam.ac.uk/pub/pre/${P}.tar.gz" |
| 52 |
+ |
| 53 |
+SLOT="0" |
| 54 |
+LICENSE="ccp4" |
| 55 |
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" |
| 56 |
+IUSE="" |
| 57 |
+ |
| 58 |
+CDEPEND=" |
| 59 |
+ sci-libs/clipper |
| 60 |
+ sci-libs/fftw:2.1 |
| 61 |
+ sci-libs/libccp4[fortran] |
| 62 |
+ sci-libs/mmdb |
| 63 |
+ >=sci-libs/cctbx-2013" |
| 64 |
+DEPEND="${CDEPEND} |
| 65 |
+ virtual/pkgconfig" |
| 66 |
+RDEPEND="${CDEPEND}" |
| 67 |
+ |
| 68 |
+S="${WORKDIR}" |
| 69 |
+ |
| 70 |
+src_prepare() { |
| 71 |
+ sed \ |
| 72 |
+ -e "s: ar :$(tc-getAR):g" \ |
| 73 |
+ -i MinLib/Makefile || die |
| 74 |
+ sed \ |
| 75 |
+ -e 's:ccp4_mtz_io.o::' \ |
| 76 |
+ -i Makefile.make || die |
| 77 |
+} |
| 78 |
+ |
| 79 |
+src_compile() { |
| 80 |
+ local myemakeargs=( |
| 81 |
+ CC=$(tc-getCC) |
| 82 |
+ CXX=$(tc-getCXX) |
| 83 |
+ CFLAGS="${CFLAGS}" |
| 84 |
+ CXXFLAGS="${CXXFLAGS}" |
| 85 |
+ LFLAGS="${LDFLAGS}" |
| 86 |
+ CLIB="${EPREFIX}/usr/$(get_libdir)" |
| 87 |
+ CCTBX_VERSION=2013 |
| 88 |
+ ICCP4="$($(tc-getPKG_CONFIG) --cflags libccp4c libccp4f mmdb)" |
| 89 |
+ ICLPR="$($(tc-getPKG_CONFIG) --cflags clipper)" |
| 90 |
+ ITBX="$($(tc-getPKG_CONFIG) --cflags cctbx)" |
| 91 |
+ ITNT="-I${EPREFIX}/usr/include/tntbx/include/" |
| 92 |
+ LCCP4="$($(tc-getPKG_CONFIG) --libs libccp4c libccp4f mmdb)" |
| 93 |
+ LCLPR="$($(tc-getPKG_CONFIG) --libs clipper)" |
| 94 |
+ LTBX="$($(tc-getPKG_CONFIG) --libs cctbx)" |
| 95 |
+ SLIB="" |
| 96 |
+ ) |
| 97 |
+ emake \ |
| 98 |
+ -C MinLib \ |
| 99 |
+ "${myemakeargs[@]}" |
| 100 |
+ emake \ |
| 101 |
+ -f Makefile.make \ |
| 102 |
+ "${myemakeargs[@]}" |
| 103 |
+} |
| 104 |
+ |
| 105 |
+src_install() { |
| 106 |
+ dobin ${PN} |
| 107 |
+} |
| 108 |
|
| 109 |
diff --git a/sci-chemistry/aimless/metadata.xml b/sci-chemistry/aimless/metadata.xml |
| 110 |
new file mode 100644 |
| 111 |
index 0000000..5ef07a3 |
| 112 |
--- /dev/null |
| 113 |
+++ b/sci-chemistry/aimless/metadata.xml |
| 114 |
@@ -0,0 +1,8 @@ |
| 115 |
+<?xml version="1.0" encoding="UTF-8"?> |
| 116 |
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
| 117 |
+<pkgmetadata> |
| 118 |
+ <herd>sci</herd> |
| 119 |
+ <maintainer> |
| 120 |
+ <email>jlec@g.o</email> |
| 121 |
+ </maintainer> |
| 122 |
+</pkgmetadata> |
Archives