Gentoo Archives: gentoo-commits

From: Justin Lecher <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
Date: Mon, 04 Apr 2011 11:19:05
Message-Id: bba7738ecbcd9b7d442a8290f6d427823551efae.jlec@gentoo
1 commit: bba7738ecbcd9b7d442a8290f6d427823551efae
2 Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
3 AuthorDate: Fri Apr 1 12:22:29 2011 +0000
4 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
5 CommitDate: Fri Apr 1 12:22:29 2011 +0000
6 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bba7738e
7
8 Missing script dirs included
9
10 (Portage version: 2.2.0_alpha29/git/Linux x86_64, signed Manifest commit with key 70EB7916)
11
12 ---
13 sci-chemistry/nmrpipe/ChangeLog | 4 ++++
14 sci-chemistry/nmrpipe/files/env-nmrpipe-new | 2 +-
15 .../nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild | 2 +-
16 3 files changed, 6 insertions(+), 2 deletions(-)
17
18 diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
19 index 774cf38..9a5668a 100644
20 --- a/sci-chemistry/nmrpipe/ChangeLog
21 +++ b/sci-chemistry/nmrpipe/ChangeLog
22 @@ -2,6 +2,10 @@
23 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
24 # $Header: $
25
26 + 01 Apr 2011; Justin Lecher <jlec@g.o>
27 + nmrpipe-5.5.2011.069.19.56.ebuild, files/env-nmrpipe-new:
28 + Missing script dirs included
29 +
30 *nmrpipe-5.5.2011.069.19.56 (11 Mar 2011)
31
32 11 Mar 2011; Justin Lecher <jlec@g.o>
33
34 diff --git a/sci-chemistry/nmrpipe/files/env-nmrpipe-new b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
35 index b504aa1..87697f7 100644
36 --- a/sci-chemistry/nmrpipe/files/env-nmrpipe-new
37 +++ b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
38 @@ -3,7 +3,7 @@ NMRCHECK="ALL"
39
40 BINTYPE="linux9"
41 NMRBINTYPE="linux9"
42 -PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl"
43 +PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl:/opt/nmrpipe/talosplus/com:/opt/nmrpipe/dynamo/com"
44
45 # NMRPipe
46 NMRBASE="/opt/nmrpipe"
47
48 diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
49 index 9965e8e..6ecb332 100644
50 --- a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
51 +++ b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
52 @@ -130,7 +130,7 @@ src_install() {
53 rm -f {talos*,spartaplus,promega}/bin/*{linux,mac,sgi6x,winxp} pdb/misc/addSeg || die
54
55 # Set the correct path to NMRPipe in the auxiliary scripts.
56 - for i in $(find com/ dynamo/surface/misc/ nmrtxt/ talos/misc talosplus/com -type f); do
57 + for i in $(find com/ dynamo/surface/misc/ nmrtxt/ talos/misc talosplus/com spartaplus/com -type f); do
58 sed -e "s%/u/delaglio%${ENMRBASE}%" -i ${i} || die \
59 "Failed patching scripts."
60 done