1 |
mgorny 15/01/29 21:23:13 |
2 |
|
3 |
Modified: raxml-7.2.6.ebuild metadata.xml ChangeLog |
4 |
Log: |
5 |
Switch to CPU_FLAGS_X86. |
6 |
|
7 |
(Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key EFB4464E!) |
8 |
|
9 |
Revision Changes Path |
10 |
1.3 sci-biology/raxml/raxml-7.2.6.ebuild |
11 |
|
12 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild?rev=1.3&view=markup |
13 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild?rev=1.3&content-type=text/plain |
14 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild?r1=1.2&r2=1.3 |
15 |
|
16 |
Index: raxml-7.2.6.ebuild |
17 |
=================================================================== |
18 |
RCS file: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild,v |
19 |
retrieving revision 1.2 |
20 |
retrieving revision 1.3 |
21 |
diff -u -r1.2 -r1.3 |
22 |
--- raxml-7.2.6.ebuild 18 Feb 2013 12:20:50 -0000 1.2 |
23 |
+++ raxml-7.2.6.ebuild 29 Jan 2015 21:23:13 -0000 1.3 |
24 |
@@ -1,6 +1,6 @@ |
25 |
-# Copyright 1999-2013 Gentoo Foundation |
26 |
+# Copyright 1999-2015 Gentoo Foundation |
27 |
# Distributed under the terms of the GNU General Public License v2 |
28 |
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild,v 1.2 2013/02/18 12:20:50 jlec Exp $ |
29 |
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.6.ebuild,v 1.3 2015/01/29 21:23:13 mgorny Exp $ |
30 |
|
31 |
EAPI=4 |
32 |
|
33 |
@@ -13,7 +13,7 @@ |
34 |
SLOT="0" |
35 |
LICENSE="GPL-2" |
36 |
KEYWORDS="~amd64 ~x86" |
37 |
-IUSE="sse3 +threads" |
38 |
+IUSE="cpu_flags_x86_sse3 +threads" |
39 |
|
40 |
# mpi is not supported in version 7.2.2. mpi is enabled by adding -DPARALLEL to CFLAGS |
41 |
DEPEND="" # mpi? ( virtual/mpi )" |
42 |
@@ -22,13 +22,13 @@ |
43 |
S="${WORKDIR}/RAxML-${PV}" |
44 |
|
45 |
pkg_pretend() { |
46 |
- use sse3 || die "This package needs sse3 support in your CPU" |
47 |
+ use cpu_flags_x86_sse3 || die "This package needs sse3 support in your CPU" |
48 |
} |
49 |
|
50 |
src_prepare() { |
51 |
epatch "${FILESDIR}"/${P}-makefile.patch |
52 |
|
53 |
- use sse3 && append-cflags -D__SIM_SSE3 |
54 |
+ use cpu_flags_x86_sse3 && append-cflags -D__SIM_SSE3 |
55 |
use threads && \ |
56 |
append-cflags -D_USE_PTHREADS && \ |
57 |
append-ldflags -pthread |
58 |
|
59 |
|
60 |
|
61 |
1.6 sci-biology/raxml/metadata.xml |
62 |
|
63 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/metadata.xml?rev=1.6&view=markup |
64 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/metadata.xml?rev=1.6&content-type=text/plain |
65 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/metadata.xml?r1=1.5&r2=1.6 |
66 |
|
67 |
Index: metadata.xml |
68 |
=================================================================== |
69 |
RCS file: /var/cvsroot/gentoo-x86/sci-biology/raxml/metadata.xml,v |
70 |
retrieving revision 1.5 |
71 |
retrieving revision 1.6 |
72 |
diff -u -r1.5 -r1.6 |
73 |
--- metadata.xml 11 Mar 2013 16:51:35 -0000 1.5 |
74 |
+++ metadata.xml 29 Jan 2015 21:23:13 -0000 1.6 |
75 |
@@ -2,7 +2,4 @@ |
76 |
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
77 |
<pkgmetadata> |
78 |
<herd>sci-biology</herd> |
79 |
- <use> |
80 |
- <flag name="sse3">Enable optimization for SSE3 capable chips</flag> |
81 |
- </use> |
82 |
</pkgmetadata> |
83 |
|
84 |
|
85 |
|
86 |
1.10 sci-biology/raxml/ChangeLog |
87 |
|
88 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/ChangeLog?rev=1.10&view=markup |
89 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/ChangeLog?rev=1.10&content-type=text/plain |
90 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/raxml/ChangeLog?r1=1.9&r2=1.10 |
91 |
|
92 |
Index: ChangeLog |
93 |
=================================================================== |
94 |
RCS file: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v |
95 |
retrieving revision 1.9 |
96 |
retrieving revision 1.10 |
97 |
diff -u -r1.9 -r1.10 |
98 |
--- ChangeLog 11 Mar 2013 16:51:35 -0000 1.9 |
99 |
+++ ChangeLog 29 Jan 2015 21:23:13 -0000 1.10 |
100 |
@@ -1,6 +1,10 @@ |
101 |
# ChangeLog for sci-biology/raxml |
102 |
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 |
103 |
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v 1.9 2013/03/11 16:51:35 jlec Exp $ |
104 |
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 |
105 |
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v 1.10 2015/01/29 21:23:13 mgorny Exp $ |
106 |
+ |
107 |
+ 29 Jan 2015; Michał Górny <mgorny@g.o> metadata.xml, |
108 |
+ raxml-7.2.6.ebuild: |
109 |
+ Switch to CPU_FLAGS_X86. |
110 |
|
111 |
11 Mar 2013; Justin Lecher <jlec@g.o> metadata.xml: |
112 |
Drop Andrey as maintainer so that bugs get assigned to sci-biology directly |
113 |
@@ -45,4 +49,3 @@ |
114 |
03 Sep 2009; Andrey Kislyuk <weaver@g.o> +metadata.xml, |
115 |
+raxml-7.0.4.ebuild: |
116 |
New package, ebuild written by me |
117 |
- |