[gentoo-commits] repo/gentoo:master commit in: dev-python/numpy/

[Michał Górny]

commit:     058d52d766940e26f45f27e8c4ac8a05cfeeb6bb
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu Oct 29 06:19:42 2020 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu Oct 29 06:51:42 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=058d52d7

dev-python/numpy: Bump to 1.19.3

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 dev-python/numpy/Manifest            |   1 +
 dev-python/numpy/numpy-1.19.3.ebuild | 145 +++++++++++++++++++++++++++++++++++
 2 files changed, 146 insertions(+)

diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest
index 67d4a3a8e30..67f3f8d1513 100644
--- a/dev-python/numpy/Manifest
+++ b/dev-python/numpy/Manifest
@@ -1,6 +1,7 @@
 DIST numpy-1.19.0.zip 7296082 BLAKE2B e388a1b8aa8fa5e23b57c69c5aa5f2b7b286a69fca6007843adbfa374d541ace7875757a302e851bc41194f565390b52777fff13da8166e7a2c6b0a0f3efd29c SHA512 24f8847ff6b72dd44db197fbd80596677f9f3c5afcc87f30c41a4c0a2ccd4ee652ca630a537997ba8fe68c4919fa488e9d8cadd9a310e5356b017f6086055850
 DIST numpy-1.19.1.zip 7301568 BLAKE2B f7c17666d8cd4f477d7946be383d2ff1656c412e23dc49c55f94a6fcb95a6cffe6b4958169b1b27e027a7d674feb96de979d8bba4f1e3d9daef9b72e7f48cafa SHA512 ddc5f5e262d6f7f6e1a8879165860427baa237b6aad5b09d5b943a36bb0d5922424aac4c0e32a2cc3e14087bf6eb671988b6ff6df0d9ab8c89724e093220eead
 DIST numpy-1.19.2.zip 7310530 BLAKE2B a019c64809bd61071a4dd5e10c2cdf6927f392ebe58b45a08529295079bca68a683502aba89847578e122271d2fa4ea6d2d5461f1e58322f550cda863d36125b SHA512 56ae348f08818e30b6675df7d41a2b03687af452d7a96356fccfce2994843c7b61918946381c3af25fe03f209413d0378ee691fc38d805491a12c464e49bb59c
+DIST numpy-1.19.3.zip 7315638 BLAKE2B 77f5ab83bfc69fcdb1c1bc0735e46914619be9e8291eb8ded3d5fa98694080f5272692453803b3924b371611014655f4532c85126c29ce1a84a4b807371cbb17 SHA512 9595e5adbad5debc7edb9fe2d4c511111a92413b6c3e5086c7dfb2f68974c0493d2dd2cb1cb8b07486b1f4fbef324fbdfa54f80a4c4cab66215980a40440f79f
 DIST numpy-html-1.16.4.zip 12097069 BLAKE2B db1f897342fbc80a761fbaee7b0eee3761dbfa04ef6c46a137bb2392caaec8256580467ce06498cceeada2639151a1ec75dafab484d64cb897c008727d6d32a5 SHA512 c44c5e1e0cb22f9dd46fe9e302030292d85e567456178fee296746a414271634e906509fb6665ac63fbfebdd13c5383574f0aa47b4fbc639063da31addc3316a
 DIST numpy-ref-1.16.4.pdf 5176571 BLAKE2B 9a875ebd1473b241d463d810a6d191581aef961158f2f82959671b554ace3ad482795e4f3e1cb7dd4632cff926c1e864c675a7624fb0f4e4f297948bf50f0564 SHA512 983ba0f34a70c011886bdbc9fd8f3f75a3a967ca29217acc76fa46e7da391296a5628c9a557ac76efb393271abfb8ee4f376d401c1cc1e5c30622e54b9325d09
 DIST numpy-user-1.16.4.pdf 596203 BLAKE2B da3ad1f0ec1c965d20656f73a970911cbb58efa73a5df89e2e6485e0dd763f483e35eea1395ac919bf35d496fb216cee954fc5d31edebc1796a24a2a7a2d12b9 SHA512 3083008547213bfa98ffa5cd8e2cea13f6947f42d83aef61502a2a852b0d5f27d727c76b42d281d7a2f4f76c78e88b12ee3d9b164b39fe1f0213ace7097357d6

diff --git a/dev-python/numpy/numpy-1.19.3.ebuild b/dev-python/numpy/numpy-1.19.3.ebuild
new file mode 100644
index 00000000000..48984ec1246
--- /dev/null
+++ b/dev-python/numpy/numpy-1.19.3.ebuild
@@ -0,0 +1,145 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+PYTHON_REQ_USE="threads(+)"
+
+FORTRAN_NEEDED=lapack
+
+DISTUTILS_USE_SETUPTOOLS=rdepend
+
+inherit distutils-r1 flag-o-matic fortran-2 multiprocessing toolchain-funcs
+
+DOC_PV="1.16.4"
+DESCRIPTION="Fast array and numerical python library"
+HOMEPAGE="https://www.numpy.org"
+SRC_URI="
+	mirror://pypi/${PN:0:1}/${PN}/${P}.zip
+	doc? (
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-html.zip -> numpy-html-${DOC_PV}.zip
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-ref.pdf -> numpy-ref-${DOC_PV}.pdf
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-user.pdf -> numpy-user-${DOC_PV}.pdf
+	)"
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
+IUSE="doc lapack"
+
+RDEPEND="
+	lapack? (
+		>=virtual/cblas-3.8
+		>=virtual/lapack-3.8
+	)
+"
+BDEPEND="
+	${RDEPEND}
+	app-arch/unzip
+	>=dev-python/cython-0.29.21[${PYTHON_USEDEP}]
+	lapack? ( virtual/pkgconfig )
+	test? (
+		>=dev-python/hypothesis-5.8.0[${PYTHON_USEDEP}]
+		>=dev-python/pytz-2019.3[${PYTHON_USEDEP}]
+		>=dev-python/cffi-1.14.0[${PYTHON_USEDEP}]
+	)
+"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-1.17.4-no-hardcode-blasv2.patch
+)
+
+distutils_enable_tests pytest
+
+src_unpack() {
+	default
+	if use doc; then
+		unzip -qo "${DISTDIR}"/numpy-html-${DOC_PV}.zip -d html || die
+	fi
+}
+
+python_prepare_all() {
+	if use lapack; then
+		local incdir="${EPREFIX}"/usr/include
+		local libdir="${EPREFIX}"/usr/$(get_libdir)
+		cat >> site.cfg <<-EOF || die
+			[blas]
+			include_dirs = ${incdir}
+			library_dirs = ${libdir}
+			blas_libs = cblas,blas
+			[lapack]
+			library_dirs = ${libdir}
+			lapack_libs = lapack
+		EOF
+	else
+		export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None
+	fi
+
+	export CC="$(tc-getCC) ${CFLAGS}"
+
+	append-flags -fno-strict-aliasing
+
+	# See progress in http://projects.scipy.org/scipy/numpy/ticket/573
+	# with the subtle difference that we don't want to break Darwin where
+	# -shared is not a valid linker argument
+	if [[ ${CHOST} != *-darwin* ]]; then
+		append-ldflags -shared
+	fi
+
+	# only one fortran to link with:
+	# linking with cblas and lapack library will force
+	# autodetecting and linking to all available fortran compilers
+	append-fflags -fPIC
+	if use lapack; then
+		NUMPY_FCONFIG="config_fc --noopt --noarch"
+		# workaround bug 335908
+		[[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95"
+	fi
+
+	# don't version f2py, we will handle it.
+	sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die
+
+	# disable fuzzed tests
+	find numpy/*/tests -name '*.py' -exec sed -i \
+		-e 's:def \(.*_fuzz\):def _\1:' {} + || die
+	# very memory- and disk-hungry
+	sed -i -e 's:test_large_zip:_&:' numpy/lib/tests/test_io.py || die
+
+	distutils-r1_python_prepare_all
+}
+
+python_compile() {
+	export MAKEOPTS=-j1 #660754
+
+	distutils-r1_python_compile ${NUMPY_FCONFIG}
+}
+
+python_test() {
+	distutils_install_for_testing --single-version-externally-managed \
+		--record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG}
+
+	cd "${TMPDIR}" || die
+
+	"${EPYTHON}" -c "
+import numpy, sys
+r = numpy.test(label='full', verbose=3)
+sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}"
+}
+
+python_install() {
+	# https://github.com/numpy/numpy/issues/16005
+	local mydistutilsargs=( build_src )
+	distutils-r1_python_install ${NUMPY_FCONFIG}
+	python_optimize
+}
+
+python_install_all() {
+	local DOCS=( LICENSE.txt README.md THANKS.txt )
+
+	if use doc; then
+		local HTML_DOCS=( "${WORKDIR}"/html/. )
+		DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf )
+	fi
+
+	distutils-r1_python_install_all
+}